RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 MSTO1Q9BUK6 570 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 C2orf40Q9H1Z8 148 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 PABPC3Q9H361 631 aaKnown RBP4.99□□□□□ -1.61
USP48-202ENST00000374730 CNOT10Q9H9A5 744 aaKnown RBP4.99□□□□□ -1.61
USP48-202ENST00000374730 ACP6Q9NPH0 428 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 MAN1C1Q9NR34 630 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 AASDHPPTQ9NRN7 309 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 ADARB2Q9NS39 739 aaKnown RBP4.99□□□□□ -1.61
USP48-202ENST00000374730 NRBP2Q9NSY0 501 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 SLC17A6Q9P2U8 582 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 RSPH14Q9UHP6 348 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 ANAPC7Q9UJX3 599 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 GGA2Q9UJY4 613 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 SCINQ9Y6U3 715 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 MROH7Q68CQ1 1323 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 PDCD11Q14690 1871 aaKnown RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 IGKV6-21A0A0C4DH24 114 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 CCDC195A0A1B0GUA6 201 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 E7ENX8 843 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 NDUFAB1O14561 156 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 MGST3O14880 152 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 FAM189A1O60320 539 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 TOM1L1O75674 476 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 LSM8O95777 96 aaKnown RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 SLC25A27O95847 323 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 ASS1P00966 412 aaKnown RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 EDN1P05305 212 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 RARGP13631 454 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 RRM1P23921 792 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 CCT5P48643 541 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 PTH2RP49190 550 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 ANXA11P50995 505 aaKnown RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 PLTPP55058 493 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 NOP14P78316 857 aaKnown RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 POU6F2P78424 691 aaPredicted RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 CNTN2Q02246 1040 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 CAV1Q03135 178 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 TAP2Q03519 686 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 SLC20A2Q08357 652 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 PTK6Q13882 451 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 BYSLQ13895 437 aaKnown RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 PCBP2Q15366 365 aaKnown RBP eCLIP4.98□□□□□ -1.61
USP48-202ENST00000374730 FLYWCH1Q4VC44 716 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 TNFAIP8L3Q5GJ75 292 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 TREML2Q5T2D2 321 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 DENND2CQ68D51 928 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 PLEKHA7Q6IQ23 1121 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 AADACL2Q6P093 401 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 RHBDF2Q6PJF5 856 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 SEPT14Q6ZU15 432 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 TRMT10CQ7L0Y3 403 aaKnown RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 PLPPR4Q7Z2D5 763 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 TRMT1LQ7Z2T5 733 aaKnown RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 ARMC9Q7Z3E5 817 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 TTC7BQ86TV6 843 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 NLRP14Q86W24 1093 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 WDR49Q8IV35 697 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 ZBTB8OSQ8IWT0 167 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 KATNAL2Q8IYT4 538 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 ABRAQ8N0Z2 381 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 FBXO25Q8TCJ0 367 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 GRK7Q8WTQ7 553 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 TCP11Q8WWU5 503 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 SEPT1Q8WYJ6 367 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 ART4Q93070 314 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 TMEM125Q96AQ2 219 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 CENPTQ96BT3 561 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 PGM2Q96G03 612 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 DMRTA2Q96SC8 542 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 JPH2Q9BR39 696 aaPredicted RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 PI4K2AQ9BTU6 479 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 TRIM31Q9BZY9 425 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 SPATC1LQ9H0A9 340 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 RSAD1Q9HA92 442 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 APOBEC3GQ9HC16 384 aaKnown RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 MRPL47Q9HD33 250 aaKnown RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 HOMER3Q9NSC5 361 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 RLIMQ9NVW2 624 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 SIDT1Q9NXL6 827 aaKnown RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 FEZ2Q9UHY8 353 aaPredicted RBP4.98□□□□□ -1.61
USP48-202ENST00000374730 ZNF180Q9UJW8 692 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 SNX24Q9Y343 169 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.98□□□□□ -1.61
USP48-202ENST00000374730 PCDHB1Q9Y5F3 818 aa4.98□□□□□ -1.61
USP48-202ENST00000374730 KAT6AQ92794 2004 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 A0A087WUV0 522 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 C5orf60A6NFR6 353 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 CXCL11O14625 94 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 OGTO15294 1046 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 YY2O15391 372 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 MPPED1O15442 326 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 CLDN3O15551 220 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 RIPK2O43353 540 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 TRAPPC3O43617 180 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 PROP1O75360 226 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 CNMDO75829 334 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 SUN1O94901 812 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 FAM107AO95990 144 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 GAS8O95995 478 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms