RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 PEX1O43933 1283 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 H2AFYO75367 372 aaKnown RBP17.13■□□□□ 0.33
RXRB-201ENST00000374680 HNRNPDQ14103 355 aaKnown RBP17.13■□□□□ 0.33
RXRB-201ENST00000374680 PTK2BQ14289 1009 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 MBTPS1Q14703 1052 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 LBRQ14739 615 aaKnown RBP17.13■□□□□ 0.33
RXRB-201ENST00000374680 ZNF423Q2M1K9 1284 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 TECRLQ5HYJ1 363 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 KLC3Q6P597 504 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 SAPCD2Q86UD0 394 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 CILP2Q8IUL8 1156 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 LILRA2Q8N149 483 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 PQLC1Q8N2U9 271 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 PIP4K2CQ8TBX8 421 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 RDH11Q8TC12 318 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 PTERQ96BW5 349 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 C3orf30Q96M34 536 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 KLHL32Q96NJ5 620 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 SERPINI1Q99574 410 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 NACA2Q9H009 215 aa17.13■□□□□ 0.33
RXRB-201ENST00000374680 ABT1Q9ULW3 272 aaKnown RBP17.13■□□□□ 0.33
RXRB-201ENST00000374680 UBDO15205 165 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 PMLP29590 882 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 RAB27AP51159 221 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 SCNN1BP51168 640 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 FASTKQ14296 549 aaKnown RBP17.12■□□□□ 0.33
RXRB-201ENST00000374680 SEMA3AQ14563 771 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 CNTN4Q8IWV2 1026 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 RMDN1Q96DB5 314 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 PKP2Q99959 881 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 BTRCQ9Y297 605 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 UBXN8O00124 270 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 GOT2P00505 430 aaKnown RBP17.12■□□□□ 0.33
RXRB-201ENST00000374680 ATP6V1B1P15313 513 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 ME2P23368 584 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 ZNF135P52742 658 aaPredicted RBP17.12■□□□□ 0.33
RXRB-201ENST00000374680 ZNF235Q14590 738 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 LGI2Q8N0V4 545 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 LRCH3Q96II8 777 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 BPIFA1Q9NP55 256 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 TLR6Q9Y2C9 796 aa17.12■□□□□ 0.33
RXRB-201ENST00000374680 CCDC162PA2VCL2 907 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 KPNA6O60684 536 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 S1PR4O95977 384 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 CDKN1CP49918 316 aaPredicted RBP17.11■□□□□ 0.33
RXRB-201ENST00000374680 CSRP3P50461 194 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 FOXA1P55317 472 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 RPS24P62847 133 aaKnown RBP17.11■□□□□ 0.33
RXRB-201ENST00000374680 KIF19Q2TAC6 998 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 PIGGQ5H8A4 983 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 C6orf52Q5T4I8 152 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 PIWIL4Q7Z3Z4 852 aaKnown RBP17.11■□□□□ 0.33
RXRB-201ENST00000374680 DDIASQ8IXT1 998 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 MRPL1Q9BYD6 325 aaKnown RBP17.11■□□□□ 0.33
RXRB-201ENST00000374680 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.11■□□□□ 0.33
RXRB-201ENST00000374680 VTI1BQ9UEU0 232 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 PCDHB8Q9UN66 801 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 TRAF6Q9Y4K3 522 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 PCDHB5Q9Y5E4 795 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 MYLKQ15746 1914 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 GPR39O43194 453 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 OR6B1O95007 311 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 IRF1P10914 325 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 CKBP12277 381 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 UQCRBP14927 111 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 FMO4P31512 558 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 ARL1P40616 181 aaPredicted RBP17.11■□□□□ 0.33
RXRB-201ENST00000374680 PSME3P61289 254 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 PDK3Q15120 406 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 CMPK2Q5EBM0 449 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 HABP4Q5JVS0 413 aaKnown RBP17.11■□□□□ 0.33
RXRB-201ENST00000374680 PRSS55Q6UWB4 352 aaPredicted RBP17.11■□□□□ 0.33
RXRB-201ENST00000374680 AMIGO2Q86SJ2 522 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 ZNF598Q86UK7 904 aaKnown RBP17.11■□□□□ 0.33
RXRB-201ENST00000374680 DCP1BQ8IZD4 617 aaKnown RBP17.11■□□□□ 0.33
RXRB-201ENST00000374680 HMGCLL1Q8TB92 370 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 FAM110BQ8TC76 370 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 LINC01599Q8WXQ3 324 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 JADE3Q92613 823 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 DCUN1D1Q96GG9 259 aa17.11■□□□□ 0.33
RXRB-201ENST00000374680 RPL10LQ96L21 214 aaKnown RBP17.11■□□□□ 0.33
RXRB-201ENST00000374680 SARS2Q9NP81 518 aaKnown RBP17.11■□□□□ 0.33
RXRB-201ENST00000374680 A0A1B0GTL3 188 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 COL6A2P12110 1019 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 FRG1Q14331 258 aaKnown RBP17.1■□□□□ 0.33
RXRB-201ENST00000374680 TLR1Q15399 786 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 RNF19BQ6ZMZ0 732 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 C16orf59Q7L2K0 433 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 ABI1Q8IZP0 508 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 PTGR2Q8N8N7 351 aaPredicted RBP17.1■□□□□ 0.33
RXRB-201ENST00000374680 ARRDC2Q8TBH0 407 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 TRPC4APQ8TEL6 797 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 A0A087X1B8 175 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 PSMD12O00232 456 aaPredicted RBP17.1■□□□□ 0.33
RXRB-201ENST00000374680 RHOQP17081 205 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 CES1P23141 567 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 HOXC13P31276 330 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 IL23RQ5VWK5 629 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 ZNF549Q6P9A3 640 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 TAS1R1Q7RTX1 841 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms