RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 PCDHGB2Q9Y5G2 931 aa12.09□□□□□ -0.47
HDAC8-201ENST00000373554 HS3ST3A1Q9Y663 406 aa12.09□□□□□ -0.47
HDAC8-201ENST00000373554 ANKRD36A6QL64 1941 aa12.09□□□□□ -0.47
HDAC8-201ENST00000373554 A0A1B0GTQ1 180 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 KCNK3O14649 394 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 FLRT2O43155 660 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 CYP2A6P11509 494 aaPredicted RBP12.08□□□□□ -0.48
HDAC8-201ENST00000373554 CEACAM1P13688 526 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 CD59P13987 128 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 PTPN7P35236 360 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 RABIFP47224 123 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 PEX5P50542 639 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 EPHB1P54762 984 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 SEMG2Q02383 582 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 RALGDSQ12967 914 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 LRRC14Q15048 493 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 PSAPL1Q6NUJ1 521 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 Q6ZSR6 202 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 DPPA4Q7L190 304 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 ZC3H18Q86VM9 953 aaKnown RBP12.08□□□□□ -0.48
HDAC8-201ENST00000373554 SPATS2Q86XZ4 545 aaKnown RBP12.08□□□□□ -0.48
HDAC8-201ENST00000373554 DCP2Q8IU60 420 aaKnown RBP12.08□□□□□ -0.48
HDAC8-201ENST00000373554 NAXDQ8IW45 347 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 DEFB124Q8NES8 71 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 ARRDC2Q8TBH0 407 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 ALG3Q92685 438 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 AGAP3Q96P47 875 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 ALS2CR12Q96Q35 445 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 KLF6Q99612 283 aaPredicted RBP12.08□□□□□ -0.48
HDAC8-201ENST00000373554 FERMT1Q9BQL6 677 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 TDRD1Q9BXT4 1180 aaKnown RBP12.08□□□□□ -0.48
HDAC8-201ENST00000373554 CEP41Q9BYV8 373 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 B4GALT6Q9UBX8 382 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 PACSIN2Q9UNF0 486 aaPredicted RBP12.08□□□□□ -0.48
HDAC8-201ENST00000373554 COQ6Q9Y2Z9 468 aa12.08□□□□□ -0.48
HDAC8-201ENST00000373554 GOLGA6L9A6NEM1 432 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 POM121BA6NF01 834 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 HACD1B0YJ81 288 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 SH3BP5O60239 455 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 PCDHGA12O60330 932 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 FZD6O60353 706 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 TJP3O95049 919 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 KCNK5O95279 499 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 PYGMP11217 842 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 EPHA8P29322 1005 aaPredicted RBP12.07□□□□□ -0.48
HDAC8-201ENST00000373554 VIPR1P32241 457 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 IGFALSP35858 605 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 CD86P42081 329 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 GRK6P43250 576 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 THOP1P52888 689 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 IL9RQ01113 521 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 XRCC4Q13426 336 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 ARHGEF7Q14155 803 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 NOMO1Q15155 1222 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 IRF4Q15306 451 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 PRAMEF14Q5SWL7 426 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 LIPIQ6XZB0 460 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 B4GALNT4Q76KP1 1039 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 PIP4P1Q86T03 277 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 CNTD1Q8N815 330 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 TP53I13Q8NBR0 393 aaPredicted RBP12.07□□□□□ -0.48
HDAC8-201ENST00000373554 SETD7Q8WTS6 366 aaKnown RBP12.07□□□□□ -0.48
HDAC8-201ENST00000373554 UBE2Q2Q8WVN8 375 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 CENPTQ96BT3 561 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 SCRN2Q96FV2 425 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 BMFQ96LC9 184 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 QKIQ96PU8 341 aaKnown RBP eCLIP12.07□□□□□ -0.48
HDAC8-201ENST00000373554 VAT1Q99536 393 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 TRPM6Q9BX84 2022 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 LZTFL1Q9NQ48 299 aa12.07□□□□□ -0.48
HDAC8-201ENST00000373554 TP53BP1Q12888 1972 aaPredicted RBP12.07□□□□□ -0.48
HDAC8-201ENST00000373554 TMEM131Q92545 1883 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 NPIPB15A6NHN6 443 aaPredicted RBP12.06□□□□□ -0.48
HDAC8-201ENST00000373554 A8MX80 341 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 H7C0C1 242 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 TOR1BO14657 336 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 RECQL5O94762 991 aaPredicted RBP12.06□□□□□ -0.48
HDAC8-201ENST00000373554 ITGAVP06756 1048 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 PDHA1P08559 390 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 CTPS1P17812 591 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 PTPN3P26045 913 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 ATP5OP48047 213 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 RXRGP48443 463 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 PFN3P60673 137 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 RPL26P61254 145 aaKnown RBP12.06□□□□□ -0.48
HDAC8-201ENST00000373554 YPEL5P62699 121 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 OTUD4Q01804 1114 aaKnown RBP12.06□□□□□ -0.48
HDAC8-201ENST00000373554 NIPAL4Q0D2K0 466 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 ZNF211Q13398 564 aaPredicted RBP12.06□□□□□ -0.48
HDAC8-201ENST00000373554 PDE1CQ14123 709 aaPredicted RBP12.06□□□□□ -0.48
HDAC8-201ENST00000373554 ACOX1Q15067 660 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 AGERQ15109 404 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 CNGA3Q16281 694 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 TEX44Q53QW1 395 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 ZNF662Q6ZS27 426 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 PARGQ86W56 976 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 CDKL3Q8IVW4 592 aaPredicted RBP12.06□□□□□ -0.48
HDAC8-201ENST00000373554 SLC22A18ASQ8N1D0 253 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 LPCAT1Q8NF37 534 aa12.06□□□□□ -0.48
HDAC8-201ENST00000373554 ACTL9Q8TC94 416 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms