RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 LHX3Q9UBR4 397 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 VPS28Q9UK41 221 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 STK38LQ9Y2H1 464 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 PCDHGC4Q9Y5F7 938 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 DOCK6Q96HP0 2047 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 TYW5A2RUC4 315 aaKnown RBP19.66■□□□□ 0.74
HDAC1-201ENST00000373548 HNRNPCL1O60812 293 aaKnown RBP19.66■□□□□ 0.74
HDAC1-201ENST00000373548 HSPA4LO95757 839 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 CKMP06732 381 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 C8AP07357 584 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 ZNF140P52738 457 aaPredicted RBP19.66■□□□□ 0.74
HDAC1-201ENST00000373548 LIPMQ5VYY2 423 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 TMC7Q7Z402 723 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 GPR150Q8NGU9 434 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 BHMTQ93088 406 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 ALG14Q96F25 216 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 SMIM14Q96QK8 99 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 TUBB6Q9BUF5 446 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 STN1Q9H668 368 aaKnown RBP19.66■□□□□ 0.74
HDAC1-201ENST00000373548 RAI2Q9Y5P3 530 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 CD3EAPO15446 510 aaKnown RBP19.66■□□□□ 0.74
HDAC1-201ENST00000373548 DLX3O60479 287 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 GLP2RO95838 553 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 ATP5BP06576 529 aaKnown RBP19.66■□□□□ 0.74
HDAC1-201ENST00000373548 PTPN4P29074 926 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 CSKP41240 450 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 SLC7A9P82251 487 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 SEMA3AQ14563 771 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 CCDC149Q6ZUS6 474 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 ZNF781Q8N8C0 355 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 MOCOSQ96EN8 888 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 TSPAN17Q96FV3 270 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 RAB3IPQ96QF0 476 aaPredicted RBP19.66■□□□□ 0.74
HDAC1-201ENST00000373548 TBC1D10AQ9BXI6 508 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 ACSS2Q9NR19 701 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 CXXC1Q9P0U4 656 aaPredicted RBP19.66■□□□□ 0.74
HDAC1-201ENST00000373548 VPS51Q9UID3 782 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 LSM7Q9UK45 103 aaKnown RBP19.66■□□□□ 0.74
HDAC1-201ENST00000373548 VWA7Q9Y334 891 aa19.66■□□□□ 0.74
HDAC1-201ENST00000373548 CAPN14A8MX76 684 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 CCDC22O60826 627 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 CRTAMO95727 393 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 FGBP02675 491 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 ADH1AP07327 375 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 GJA1P17302 382 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 PRKAA2P54646 552 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 CDH18Q13634 790 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 CSHL1Q14406 222 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 TREML1Q86YW5 311 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 KREMEN2Q8NCW0 462 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 LPCAT1Q8NF37 534 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 MDGA1Q8NFP4 955 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 TTC8Q8TAM2 541 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 CDKN2AIPNLQ96HQ2 116 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 MRPL57Q9BQC6 102 aaKnown RBP19.65■□□□□ 0.74
HDAC1-201ENST00000373548 ZBED2Q9BTP6 218 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 MRPL46Q9H2W6 279 aaKnown RBP19.65■□□□□ 0.74
HDAC1-201ENST00000373548 NLE1Q9NVX2 485 aaPredicted RBP19.65■□□□□ 0.74
HDAC1-201ENST00000373548 DNAJC28Q9NX36 388 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 CFAP97Q9P2B7 532 aa19.65■□□□□ 0.74
HDAC1-201ENST00000373548 DNMT3BQ9UBC3 853 aaKnown RBP19.65■□□□□ 0.74
HDAC1-201ENST00000373548 SERPINA6P08185 405 aa19.64■□□□□ 0.74
HDAC1-201ENST00000373548 GRIA4P48058 902 aa19.64■□□□□ 0.74
HDAC1-201ENST00000373548 IDH3AP50213 366 aa19.64■□□□□ 0.74
HDAC1-201ENST00000373548 CDKN2DP55273 166 aa19.64■□□□□ 0.74
HDAC1-201ENST00000373548 TRAF2Q12933 501 aa19.64■□□□□ 0.74
HDAC1-201ENST00000373548 USP4Q13107 963 aa19.64■□□□□ 0.74
HDAC1-201ENST00000373548 INO80DQ53TQ3 878 aaPredicted RBP19.64■□□□□ 0.74
HDAC1-201ENST00000373548 HTR3DQ70Z44 454 aa19.64■□□□□ 0.74
HDAC1-201ENST00000373548 DRC3Q9H069 523 aa19.64■□□□□ 0.74
HDAC1-201ENST00000373548 FAM96AQ9H5X1 160 aa19.64■□□□□ 0.74
HDAC1-201ENST00000373548 CRYL1Q9Y2S2 319 aa19.64■□□□□ 0.74
HDAC1-201ENST00000373548 INSL6Q9Y581 213 aa19.64■□□□□ 0.74
HDAC1-201ENST00000373548 A0A1W2PRU2 124 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 A8MUI8 341 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 WISP3O95389 354 aaPredicted RBP19.64■□□□□ 0.73
HDAC1-201ENST00000373548 ATP6V1G2O95670 118 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 CHRNGP07510 517 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 CALB2P22676 271 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 KPNA2P52292 529 aaKnown RBP19.64■□□□□ 0.73
HDAC1-201ENST00000373548 ALDH18A1P54886 795 aaKnown RBP19.64■□□□□ 0.73
HDAC1-201ENST00000373548 ERVFC1P60507 584 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 RIPK1Q13546 671 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 TAF1AQ15573 450 aaPredicted RBP19.64■□□□□ 0.73
HDAC1-201ENST00000373548 MRNIPQ6NTE8 343 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 NCEH1Q6PIU2 408 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 GLT6D1Q7Z4J2 308 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 BBS7Q8IWZ6 715 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 DCAF4L2Q8NA75 395 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 OR4L1Q8NH43 312 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 CDH19Q9H159 772 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 TLE6Q9H808 572 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 GPAMQ9HCL2 828 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 CATSPERZQ9NTU4 200 aa19.64■□□□□ 0.73
HDAC1-201ENST00000373548 FCF1Q9Y324 198 aaKnown RBP19.64■□□□□ 0.73
HDAC1-201ENST00000373548 MTCL1Q9Y4B5 1905 aaKnown RBP19.64■□□□□ 0.73
HDAC1-201ENST00000373548 CCR10P46092 362 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 NAGLUP54802 743 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 SNCBQ16143 134 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 FAM83EQ2M2I3 478 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms