RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 RAD51AP1Q96B01 352 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 TMEM176AQ96HP8 235 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 FRMD6Q96NE9 622 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 CYTH2Q99418 400 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 MROH8Q9H579 483 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 RPF1Q9H9Y2 349 aaKnown RBP8.28□□□□□ -1.08
GARNL3-201ENST00000373386 ERGIC3Q9Y282 383 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 HEATR9A2RTY3 570 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 ZNF98A6NK75 572 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 SOCS7O14512 581 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 CXCL11O14625 94 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 TSPAN6O43657 245 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 SNAP29O95721 258 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 DLDP09622 509 aaKnown RBP8.28□□□□□ -1.08
GARNL3-201ENST00000373386 ATP6V1B1P15313 513 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 NOS3P29474 1203 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 SSTR3P32745 418 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-201ENST00000373386 RPL22P35268 128 aaKnown RBP8.28□□□□□ -1.08
GARNL3-201ENST00000373386 VAC14Q08AM6 782 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 DUSP4Q13115 394 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 KCNJ11Q14654 390 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 TSC22D1Q15714 1073 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 PRPF38BQ5VTL8 546 aaKnown RBP8.28□□□□□ -1.08
GARNL3-201ENST00000373386 CACHD1Q5VU97 1274 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 RWDD4Q6NW29 188 aaKnown RBP8.28□□□□□ -1.08
GARNL3-201ENST00000373386 LCLAT1Q6UWP7 414 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 LRRC6Q86X45 466 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 DEPDC4Q8N2C3 294 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 RNF149Q8NC42 400 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 EMID1Q96A84 441 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-201ENST00000373386 RAB7BQ96AH8 199 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 FAF2Q96CS3 445 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 TRMT2BQ96GJ1 504 aaKnown RBP8.28□□□□□ -1.08
GARNL3-201ENST00000373386 OXNAD1Q96HP4 312 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-201ENST00000373386 FAM84AQ96KN4 292 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 CNPY3Q9BT09 278 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 ZSCAN5AQ9BUG6 496 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 ADAM33Q9BZ11 813 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 SLC6A17Q9H1V8 727 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 KCNK13Q9HB14 408 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 NCKIPSDQ9NZQ3 722 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 SIX4Q9UIU6 781 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 GINS2Q9Y248 185 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 IPPQ9Y573 584 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 BCLAF3A2AJT9 711 aaKnown RBP8.27□□□□□ -1.08
GARNL3-201ENST00000373386 DBX1A6NMT0 343 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 F8W8V4 182 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 TNPO2O14787 897 aaKnown RBP8.27□□□□□ -1.08
GARNL3-201ENST00000373386 CST8O60676 142 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 MAGEC1O60732 1142 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 SERPINI2O75830 405 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 S100A9P06702 114 aaKnown RBP8.27□□□□□ -1.08
GARNL3-201ENST00000373386 RPS17P08708 135 aaKnown RBP8.27□□□□□ -1.08
GARNL3-201ENST00000373386 PIM1P11309 404 aaPredicted RBP8.27□□□□□ -1.08
GARNL3-201ENST00000373386 IL1R2P27930 398 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 GALNSP34059 522 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 RPL5P46777 297 aaKnown RBP8.27□□□□□ -1.08
GARNL3-201ENST00000373386 NPY2RP49146 381 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 AIF1P55008 147 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 SP4Q02446 784 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 STX3Q13277 289 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 DPYSL3Q14195 570 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 MINDY4Q4G0A6 757 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 MSS51Q4VC12 460 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 ANKRD22Q5VYY1 191 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 TXNRD3NBQ6F5E7 133 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 LIN54Q6MZP7 749 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 BNC2Q6ZN30 1099 aaPredicted RBP8.27□□□□□ -1.08
GARNL3-201ENST00000373386 SH2D5Q6ZV89 423 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 ERI1Q8IV48 349 aaKnown RBP8.27□□□□□ -1.08
GARNL3-201ENST00000373386 GPC2Q8N158 579 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 CARFQ8N187 725 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 MCUQ8NE86 351 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 FBXO30Q8TB52 745 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 NRG4Q8WWG1 115 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 HPS1Q92902 700 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 C17orf62Q9BQA9 187 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 PAIP1Q9H074 479 aaKnown RBP8.27□□□□□ -1.08
GARNL3-201ENST00000373386 CDT1Q9H211 546 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 TIGARQ9NQ88 270 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 TAS2R1Q9NYW7 299 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 PAK5Q9P286 719 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 TINAGQ9UJW2 476 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 DTX4Q9Y2E6 619 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 TEX264Q9Y6I9 313 aa8.27□□□□□ -1.08
GARNL3-201ENST00000373386 MDM4O15151 490 aa8.27□□□□□ -1.09
GARNL3-201ENST00000373386 TBX10O75333 385 aa8.27□□□□□ -1.09
GARNL3-201ENST00000373386 CNMDO75829 334 aa8.27□□□□□ -1.09
GARNL3-201ENST00000373386 OR6B1O95007 311 aa8.27□□□□□ -1.09
GARNL3-201ENST00000373386 SNAPINO95295 136 aa8.27□□□□□ -1.09
GARNL3-201ENST00000373386 GARSP41250 739 aaKnown RBP8.27□□□□□ -1.09
GARNL3-201ENST00000373386 HTR2BP41595 481 aa8.27□□□□□ -1.09
GARNL3-201ENST00000373386 ETV4P43268 484 aa8.27□□□□□ -1.09
GARNL3-201ENST00000373386 ERFP50548 548 aa8.27□□□□□ -1.09
GARNL3-201ENST00000373386 HERC3Q15034 1050 aa8.27□□□□□ -1.09
GARNL3-201ENST00000373386 PCBP1Q15365 356 aaKnown RBP eCLIP8.27□□□□□ -1.09
GARNL3-201ENST00000373386 DCAF6Q58WW2 860 aa8.27□□□□□ -1.09
GARNL3-201ENST00000373386 AAGABQ6PD74 315 aa8.27□□□□□ -1.09
GARNL3-201ENST00000373386 ACAD11Q709F0 780 aa8.27□□□□□ -1.09
GARNL3-201ENST00000373386 OR52K1Q8NGK4 314 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms