RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 PHF24Q9UPV7 400 aa18.82■□□□□ 0.6
USP49-202ENST00000373010 ACSL4O60488 711 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 GOT2P00505 430 aaKnown RBP18.81■□□□□ 0.6
USP49-202ENST00000373010 THRAP10827 490 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 HOXD9P28356 352 aaPredicted RBP18.81■□□□□ 0.6
USP49-202ENST00000373010 PPARGP37231 505 aaPredicted RBP18.81■□□□□ 0.6
USP49-202ENST00000373010 NUDT2P50583 147 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 ELAVL2Q12926 359 aaKnown RBP18.81■□□□□ 0.6
USP49-202ENST00000373010 BFSP2Q13515 415 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 GPR158Q5T848 1215 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 FAM126BQ8IXS8 530 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 PPFIBP2Q8ND30 876 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 HIPK4Q8NE63 616 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 FBXO22Q8NEZ5 403 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 PHF21BQ96EK2 531 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 FEM1CQ96JP0 617 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 CCDC28BQ9BUN5 200 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 CREBZFQ9NS37 354 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 COMMD8Q9NX08 183 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 ZFP37Q9Y6Q3 630 aaPredicted RBP18.81■□□□□ 0.6
USP49-202ENST00000373010 CHD5Q8TDI0 1954 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.81■□□□□ 0.6
USP49-202ENST00000373010 RGSL1A5PLK6 1076 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 MAP3K7O43318 606 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 ARSAP15289 507 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 KCNC1P48547 511 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 RPS24P62847 133 aaKnown RBP18.81■□□□□ 0.6
USP49-202ENST00000373010 SULT2A1Q06520 285 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 SEMA3AQ14563 771 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 IL31Q6EBC2 164 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 KLC3Q6P597 504 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 FBXW8Q8N3Y1 598 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 CPSF7Q8N684 471 aaKnown RBP18.81■□□□□ 0.6
USP49-202ENST00000373010 NSMCE3Q96MG7 304 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 SPON2Q9BUD6 331 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 NACA2Q9H009 215 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 ALG9Q9H6U8 611 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 S100A14Q9HCY8 104 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 NDE1Q9NXR1 346 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 DNMT3LQ9UJW3 386 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 POMPQ9Y244 141 aa18.81■□□□□ 0.6
USP49-202ENST00000373010 CCDC162PA2VCL2 907 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 SDHDO14521 159 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 SKAP2O75563 359 aaPredicted RBP18.8■□□□□ 0.6
USP49-202ENST00000373010 IPO13O94829 963 aaKnown RBP18.8■□□□□ 0.6
USP49-202ENST00000373010 FGF1P05230 155 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 ATP5C1P36542 298 aaKnown RBP18.8■□□□□ 0.6
USP49-202ENST00000373010 KPNA1P52294 538 aaPredicted RBP18.8■□□□□ 0.6
USP49-202ENST00000373010 GNA12Q03113 381 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 SMARCB1Q12824 385 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 BLMHQ13867 455 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 GALNT7Q86SF2 657 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 CRIPAKQ8N1N5 446 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 SLC26A7Q8TE54 656 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 SCLYQ96I15 445 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 ZNF512Q96ME7 567 aaPredicted RBP18.8■□□□□ 0.6
USP49-202ENST00000373010 TTLL2Q9BWV7 592 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 FKBP6O75344 327 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 WISP3O95389 354 aaPredicted RBP18.8■□□□□ 0.6
USP49-202ENST00000373010 RBP1P09455 135 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 HLA-DPA1P20036 260 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 RGRP47804 291 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 ACAP2Q15057 778 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 ZNF549Q6P9A3 640 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 DENND1CQ8IV53 801 aa18.8■□□□□ 0.6
USP49-202ENST00000373010 CD3EAPO15446 510 aaKnown RBP18.79■□□□□ 0.6
USP49-202ENST00000373010 GLP2RO95838 553 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 SERPINF2P08697 491 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 PRSS56P0CW18 603 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 OR1D2P34982 312 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 ACVR1Q04771 509 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 CYLC2Q14093 348 aaPredicted RBP18.79■□□□□ 0.6
USP49-202ENST00000373010 ACBD5Q5T8D3 534 aaPredicted RBP18.79■□□□□ 0.6
USP49-202ENST00000373010 C2orf15Q8WU43 125 aaKnown RBP18.79■□□□□ 0.6
USP49-202ENST00000373010 RCN3Q96D15 328 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 EXOC2Q96KP1 924 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 COPG1Q9Y678 874 aaKnown RBP18.79■□□□□ 0.6
USP49-202ENST00000373010 H3BNC9 293 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 SGSHP51688 502 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 MTTPP55157 894 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 C5orf22Q49AR2 442 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 RNF111Q6ZNA4 994 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 LMNTD2Q8IXW0 634 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 RP9Q8TA86 221 aaKnown RBP18.79■□□□□ 0.6
USP49-202ENST00000373010 FAM136AQ96C01 138 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 PRICKLE1Q96MT3 831 aaPredicted RBP18.79■□□□□ 0.6
USP49-202ENST00000373010 TMEM175Q9BSA9 504 aa18.79■□□□□ 0.6
USP49-202ENST00000373010 TRPC5OSA6NMA1 111 aa18.78■□□□□ 0.6
USP49-202ENST00000373010 RPP40O75818 363 aaKnown RBP18.78■□□□□ 0.6
USP49-202ENST00000373010 MYCP01106 439 aaPredicted RBP18.78■□□□□ 0.6
USP49-202ENST00000373010 SP100P23497 879 aaPredicted RBP18.78■□□□□ 0.6
USP49-202ENST00000373010 TIAL1Q01085 375 aaKnown RBP eCLIP18.78■□□□□ 0.6
USP49-202ENST00000373010 ZRSR2Q15696 482 aaKnown RBP18.78■□□□□ 0.6
USP49-202ENST00000373010 AAGABQ6PD74 315 aa18.78■□□□□ 0.6
USP49-202ENST00000373010 DSELQ8IZU8 1212 aa18.78■□□□□ 0.6
USP49-202ENST00000373010 BRSK1Q8TDC3 778 aa18.78■□□□□ 0.6
USP49-202ENST00000373010 SMIM14Q96QK8 99 aa18.78■□□□□ 0.6
USP49-202ENST00000373010 TRIB3Q96RU7 358 aa18.78■□□□□ 0.6
USP49-202ENST00000373010 MAGEH1Q9H213 219 aa18.78■□□□□ 0.6
USP49-202ENST00000373010 GKN1Q9NS71 199 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms