RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 LOC100653049A0A140TA62 436 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 SLC38A8A6NNN8 435 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 ZNF701M0R085 212 aaPredicted RBP11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 HNRNPRO43390 633 aaKnown RBP11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 KRT34O76011 436 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 POLBP06746 335 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 NPR3P17342 541 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 PTPN2P17706 415 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 HOXA9P31269 272 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 ALDH3B2P48448 385 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 CDK9P50750 372 aaKnown RBP11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 ADARP55265 1226 aaKnown RBP11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 ATAT1Q5SQI0 421 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 FAM183BPQ6ZVS7 135 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 GPR149Q86SP6 731 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 DSELQ8IZU8 1212 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 RIN3Q8TB24 985 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 C8orf48Q96LL4 319 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 LENG8Q96PV6 779 aaPredicted RBP11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 PLEKHG4BQ96PX9 1271 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 OSBPL11Q9BXB4 747 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 ZNF385DQ9H6B1 395 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 UTP6Q9NYH9 597 aaKnown RBP11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 EPS15L1Q9UBC2 864 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 ZNHIT2Q9UHR6 403 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 ANKRD6Q9Y2G4 727 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 RAP2CQ9Y3L5 183 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 CEPT1Q9Y6K0 416 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 EYSQ5T1H1 3165 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 REV3LO60673 3130 aa11.54□□□□□ -0.56
TSPAN1-201ENST00000372003 CCDC160A6NGH7 325 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 MATN2O00339 956 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 PIK3R2O00459 728 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 HDAC3O15379 428 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 SORBS2O94875 1100 aaKnown RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 CDH2P19022 906 aaPredicted RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 PPARGP37231 505 aaPredicted RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 RGS7P49802 495 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 NUDT2P50583 147 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 LIMK2P53671 638 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 BCAT1P54687 386 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 CSE1LP55060 971 aaKnown RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 SLC6A3Q01959 620 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 BST2Q10589 180 aaKnown RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 C15orf59Q2T9L4 293 aaPredicted RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 SYCP2LQ5T4T6 812 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 ACBD5Q5T8D3 534 aaPredicted RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 CLEC14AQ86T13 490 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 TRIM74Q86UV6 250 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 TRIM73Q86UV7 250 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 ITIH5Q86UX2 942 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 PIGZQ86VD9 579 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 PSTKQ8IV42 348 aaKnown RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 TDRD5Q8NAT2 981 aaKnown RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 SMRP1Q8NCR6 262 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 HIPK4Q8NE63 616 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 SCAMP5Q8TAC9 235 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 HM13Q8TCT9 377 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 PDCD6IPQ8WUM4 868 aaKnown RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 HTR3CQ8WXA8 447 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 PSMG2Q969U7 264 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 RBBP8Q99708 897 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 SLC4A5Q9BY07 1137 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 GRIP2Q9C0E4 1043 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 EFCAB1Q9HAE3 211 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 CSNK1G1Q9HCP0 422 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 TUBA8Q9NY65 449 aaPredicted RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 RSL24D1Q9UHA3 163 aaKnown RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 ATG2AQ2TAZ0 1938 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 GRXCR2A6NFK2 248 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 G3V2L1 256 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 TIMM44O43615 452 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 C8BP07358 591 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 RHOP08100 348 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 GJA1P17302 382 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 PSMC3P17980 439 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 ARRB2P32121 409 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 SLC5A3P53794 718 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 EMP3P54852 163 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 PPIDQ08752 370 aaKnown RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 PRKAA1Q13131 559 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 SLC9B1Q4ZJI4 515 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 SH3PXD2AQ5TCZ1 1133 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 OLFML1Q6UWY5 402 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 ATG14Q6ZNE5 492 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 GPRIN1Q7Z2K8 1008 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 ZNF554Q86TJ5 538 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 TMEM110Q86TL2 294 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 CHERPQ8IWX8 916 aaKnown RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 ZNF781Q8N8C0 355 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 TMEM102Q8N9M5 508 aaPredicted RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 CENPIQ92674 756 aaPredicted RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 CERS2Q96G23 380 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 SPATA17Q96L03 361 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 ZNF597Q96LX8 424 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 CNBD2Q96M20 576 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 RIPOR3Q96MK2 946 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 PRPF18Q99633 342 aaKnown RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 MRPL1Q9BYD6 325 aaKnown RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 IL22Q9GZX6 179 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms