RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 CPA6Q8N4T0 437 aa26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 PAF1Q8N7H5 531 aa26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 C2CD4AQ8NCU7 369 aaPredicted RBP26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 ELSPBP1Q96BH3 223 aa26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 SRPK1Q96SB4 655 aaKnown RBP26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 CIPCQ9C0C6 399 aa26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 RHOJQ9H4E5 214 aa26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 COPEO14579 308 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 RPP40O75818 363 aaKnown RBP26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 PIGNO95427 931 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 DLDP09622 509 aaKnown RBP26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 PSMC3P17980 439 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 RECQLP46063 649 aaPredicted RBP26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 LRRC14Q15048 493 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 C12orf40Q86WS4 652 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 MDGA1Q8NFP4 955 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 PIH1D2Q8WWB5 315 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 SPOCK2Q92563 424 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 DNAJC1Q96KC8 554 aaKnown RBP26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 CCDC134Q9H6E4 229 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 MAGEE1Q9HCI5 957 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 HPS4Q9NQG7 708 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 NLE1Q9NVX2 485 aaPredicted RBP26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 MKS1Q9NXB0 559 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 GGT7Q9UJ14 662 aa26.4■■□□□ 1.82
ATPAF1-202ENST00000371937 ALDOAP04075 364 aaKnown RBP26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 LPOP22079 712 aaPredicted RBP26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 ABL2P42684 1182 aa26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 CCT5P48643 541 aa26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 ZNF140P52738 457 aaPredicted RBP26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 CTBP1Q13363 440 aa26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 GRAMD4Q6IC98 578 aa26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 TAX1BP1Q86VP1 789 aa26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 ZC3HC1Q86WB0 502 aaKnown RBP26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 VPS39Q96JC1 886 aa26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 IQCGQ9H095 443 aaKnown RBP26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 EPN3Q9H201 632 aa26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 FBXO5Q9UKT4 447 aa26.39■■□□□ 1.82
ATPAF1-202ENST00000371937 DOCK8Q8NF50 2099 aa26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 BNIP3LO60238 219 aa26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 AHSGP02765 367 aa26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 POU3F3P20264 500 aaPredicted RBP26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 PSMA3P25788 255 aa26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 SLC1A2P43004 574 aa26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 ARSDP51689 593 aa26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 CCNHP51946 323 aaPredicted RBP26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 IL9RQ01113 521 aa26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 DENND6AQ8IWF6 608 aa26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 ST13P5Q8NFI4 369 aaPredicted RBP26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 TCP10LQ8TDR4 215 aa26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 MRGPRX3Q96LB0 322 aa26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 TBATAQ96M53 351 aa26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 ZNF641Q96N77 438 aaPredicted RBP26.39■■□□□ 1.81
ATPAF1-202ENST00000371937 OTOL1A6NHN0 477 aaPredicted RBP26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 TPP1O14773 563 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 GKP32189 559 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 SERPINB8P50452 374 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 RUNX3Q13761 415 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 GAB4Q2WGN9 574 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 DPY19L3Q6ZPD9 716 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 PTAR1Q7Z6K3 402 aaPredicted RBP26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 GALNT7Q86SF2 657 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 NDUFAF2Q8N183 169 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 DCLK2Q8N568 766 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 OR13C4Q8NGS5 318 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 CYB5D2Q8WUJ1 264 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 ISL2Q96A47 359 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 ATXN7L3BQ96GX2 97 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 NECTIN4Q96NY8 510 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 MLXIPLQ9NP71 852 aa26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 KIF26AQ9ULI4 1882 aaPredicted RBP26.38■■□□□ 1.81
ATPAF1-202ENST00000371937 A0A1W2PPC1 479 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 AURKAO14965 403 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 BUD23O43709 281 aaKnown RBP26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 ASMTLO95671 621 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 TYK2P29597 1187 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 LTBRP36941 435 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 POLD2P49005 469 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 NEK3P51956 506 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 TMPRSS15P98073 1019 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 ILF2Q12905 390 aaKnown RBP26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 GRIN2CQ14957 1233 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 HHATQ5VTY9 493 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 Q6ZVU0 165 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 OTUD6BQ8N6M0 293 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 CDKN2AIPNLQ96HQ2 116 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 MSLNLQ96KJ4 702 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 TTYH1Q9H313 450 aaPredicted RBP26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 SUV39H2Q9H5I1 410 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 PCMTD2Q9NV79 361 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 ELOVL2Q9NXB9 296 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 PLA2G4CQ9UP65 541 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 MTO1Q9Y2Z2 717 aaKnown RBP26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 A0A1W2PQ67 120 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 WASH3PC4AMC7 463 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 CD151P48509 253 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 WDR4P57081 412 aaKnown RBP26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 ST8SIA6P61647 398 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 COL19A1Q14993 1142 aa26.37■■□□□ 1.81
ATPAF1-202ENST00000371937 EIF4HQ15056 248 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms