RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 LGMNQ99538 433 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 DPH1Q9BZG8 443 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 CBX8Q9HC52 389 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 CWC15Q9P013 229 aaKnown RBP16.24■□□□□ 0.19
VMA21-202ENST00000370361 RCOR3Q9P2K3 495 aaPredicted RBP16.24■□□□□ 0.19
VMA21-202ENST00000370361 KLQ9UEF7 1012 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 PADI4Q9UM07 663 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 PCDHB1Q9Y5F3 818 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 ATMINO43313 823 aaPredicted RBP16.23■□□□□ 0.19
VMA21-202ENST00000370361 BUB1BO60566 1050 aaPredicted RBP16.23■□□□□ 0.19
VMA21-202ENST00000370361 TNFP01375 233 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 KRT10P13645 584 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 TGM2P21980 687 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 RBMS1P29558 406 aaKnown RBP16.23■□□□□ 0.19
VMA21-202ENST00000370361 SRP54P61011 504 aaKnown RBP16.23■□□□□ 0.19
VMA21-202ENST00000370361 COL9A2Q14055 689 aaPredicted RBP16.23■□□□□ 0.19
VMA21-202ENST00000370361 SPIDRQ14159 915 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 ZNF235Q14590 738 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 INPP5AQ14642 412 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 LBRQ14739 615 aaKnown RBP16.23■□□□□ 0.19
VMA21-202ENST00000370361 CA9Q16790 459 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 SKOR2Q2VWA4 1001 aaPredicted RBP16.23■□□□□ 0.19
VMA21-202ENST00000370361 TMCO3Q6UWJ1 677 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 ENPP7Q6UWV6 458 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 CYP4V2Q6ZWL3 525 aaPredicted RBP16.23■□□□□ 0.19
VMA21-202ENST00000370361 DPPA4Q7L190 304 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 HID1Q8IV36 788 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 RBM15Q96T37 977 aaKnown RBP eCLIP16.23■□□□□ 0.19
VMA21-202ENST00000370361 LCMT1Q9UIC8 334 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 IGSF10Q6WRI0 2623 aa16.23■□□□□ 0.19
VMA21-202ENST00000370361 TRAFD1O14545 582 aaPredicted RBP16.22■□□□□ 0.19
VMA21-202ENST00000370361 MUSKO15146 869 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 MPOP05164 745 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 SCNN1BP51168 640 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 CDH6P55285 790 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 TLE3Q04726 772 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 PEX6Q13608 980 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 ALG11Q2TAA5 492 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 ZSCAN23Q3MJ62 389 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 TDRD12Q587J7 1177 aaKnown RBP16.22■□□□□ 0.19
VMA21-202ENST00000370361 LIPIQ6XZB0 460 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 GPR155Q7Z3F1 870 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 SPACA3Q8IXA5 215 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 ARL14Q8N4G2 192 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 NPWQ8N729 165 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 WDR36Q8NI36 951 aaKnown RBP16.22■□□□□ 0.19
VMA21-202ENST00000370361 NAP1L5Q96NT1 182 aaPredicted RBP16.22■□□□□ 0.19
VMA21-202ENST00000370361 FCRL3Q96P31 734 aaPredicted RBP16.22■□□□□ 0.19
VMA21-202ENST00000370361 CLPBQ9H078 707 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 IP6K2Q9UHH9 426 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 LRRK1Q38SD2 2015 aa16.22■□□□□ 0.19
VMA21-202ENST00000370361 ANKRD36A6QL64 1941 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 ASXL3Q9C0F0 2248 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 PTPRQQ9UMZ3 2332 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 CAPN8A6NHC0 703 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 PSMD11O00231 422 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 HTRA2O43464 458 aaPredicted RBP16.21■□□□□ 0.19
VMA21-202ENST00000370361 RECQL5O94762 991 aaPredicted RBP16.21■□□□□ 0.19
VMA21-202ENST00000370361 SERPING1P05155 500 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 PCCBP05166 539 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 HOXB3P14651 431 aaPredicted RBP16.21■□□□□ 0.19
VMA21-202ENST00000370361 PNLIPP16233 465 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 ITIH2P19823 946 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 ITPKBP27987 946 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 TRIM23P36406 574 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 RGRP47804 291 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 TMPRSS3P57727 454 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 RALGDSQ12967 914 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 C1orf61Q13536 156 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 E4F1Q66K89 784 aaPredicted RBP16.21■□□□□ 0.19
VMA21-202ENST00000370361 POLNQ7Z5Q5 900 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 LUZP1Q86V48 1076 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 NDUFAF2Q8N183 169 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 ATPAF2Q8N5M1 289 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 OR56A4Q8NGH8 313 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 PCDH19Q8TAB3 1148 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 LIN37Q96GY3 246 aaPredicted RBP16.21■□□□□ 0.19
VMA21-202ENST00000370361 SLC46A1Q96NT5 459 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 NUDCD1Q96RS6 583 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 CCDC3Q9BQI4 270 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 MGME1Q9BQP7 344 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 TCEAL2Q9H3H9 227 aaPredicted RBP16.21■□□□□ 0.19
VMA21-202ENST00000370361 ASCL3Q9NQ33 180 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.21■□□□□ 0.19
VMA21-202ENST00000370361 GPR34Q9UPC5 381 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 COQ6Q9Y2Z9 468 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 ENTPD2Q9Y5L3 495 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 LOC400499M0QZD8 3231 aa16.21■□□□□ 0.19
VMA21-202ENST00000370361 LRP4O75096 1905 aa16.2■□□□□ 0.18
VMA21-202ENST00000370361 CCDC187A0A096LP49 1063 aa16.2■□□□□ 0.18
VMA21-202ENST00000370361 NTN3O00634 580 aaPredicted RBP16.2■□□□□ 0.18
VMA21-202ENST00000370361 ATXN7O15265 892 aaPredicted RBP16.2■□□□□ 0.18
VMA21-202ENST00000370361 ZW10O43264 779 aa16.2■□□□□ 0.18
VMA21-202ENST00000370361 CYP2A6P11509 494 aaPredicted RBP16.2■□□□□ 0.18
VMA21-202ENST00000370361 TEAD1P28347 426 aa16.2■□□□□ 0.18
VMA21-202ENST00000370361 ZBED6P86452 979 aa16.2■□□□□ 0.18
VMA21-202ENST00000370361 CCDC173Q0VFZ6 552 aa16.2■□□□□ 0.18
VMA21-202ENST00000370361 HADHQ16836 314 aaKnown RBP16.2■□□□□ 0.18
VMA21-202ENST00000370361 ZSWIM9Q86XI8 627 aa16.2■□□□□ 0.18
VMA21-202ENST00000370361 NETO2Q8NC67 525 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms