RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 CBX2Q14781 532 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 TTMPQ5BVD1 217 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 CDKL4Q5MAI5 379 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 OR52E8Q6IFG1 317 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 IDO2Q6ZQW0 420 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 ZNF571Q7Z3V5 609 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 CPSF7Q8N684 471 aaKnown RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 C1orf127Q8N9H9 656 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 PDZD8Q8NEN9 1154 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 GPR156Q8NFN8 814 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 RAB3IL1Q8TBN0 382 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 METTL6Q8TCB7 284 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 WNT8BQ93098 351 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 CCDC74BQ96LY2 380 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 IFIH1Q9BYX4 1025 aaKnown RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 BCL2L14Q9BZR8 327 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 FAM192AQ9GZU8 254 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 RNF208Q9H0X6 261 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 TRIM45Q9H8W5 580 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 ACTR5Q9H9F9 607 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 GDAP2Q9NXN4 497 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 COX16Q9P0S2 106 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 DNAJB4Q9UDY4 337 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 SIX4Q9UIU6 781 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 NOCTQ9UK39 431 aaKnown RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 PADI3Q9ULW8 664 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 FNDC1Q4ZHG4 1894 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 PIRO00625 290 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 PROM1O43490 865 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 SYN1P17600 705 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 ITGAXP20702 1163 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 MAGEA1P43355 309 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 MTF1Q14872 753 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 ADRM1Q16186 407 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 THEM4Q5T1C6 240 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 ZNF618Q5T7W0 954 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 ANKRD20A1Q5TYW2 823 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 PDZD4Q76G19 769 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 LRRC8DQ7L1W4 858 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 LIMS2Q7Z4I7 341 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 CREG2Q8IUH2 290 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 PSTKQ8IV42 348 aaKnown RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 SCUBE3Q8IX30 993 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 GLIS1Q8NBF1 620 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 OLIG1Q8TAK6 271 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 FOXJ1Q92949 421 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 HDAC10Q969S8 669 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 NMD3Q96D46 503 aaKnown RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 KIF12Q96FN5 646 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 ZNF668Q96K58 619 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 DEFB118Q96PH6 123 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 PPP1R16BQ96T49 567 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 ISCUQ9H1K1 167 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 HIPK3Q9H422 1215 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 CAAP1Q9H8G2 361 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 APOBEC3GQ9HC16 384 aaKnown RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 BRD7Q9NPI1 651 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 ZFP57Q9NU63 452 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 TRMT13Q9NUP7 481 aaKnown RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 NAGPAQ9UK23 515 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 RPS6KA6Q9UK32 745 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 PCDHGC3Q9UN70 934 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 APOBEC2Q9Y235 224 aaKnown RBP7.56□□□□□ -1.2
BRCC3-203ENST00000369459 LRRC42Q9Y546 428 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 PCDHGA10Q9Y5H3 936 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 NCANO14594 1321 aa7.56□□□□□ -1.2
BRCC3-203ENST00000369459 MYH10P35580 1976 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 UMODL1Q5DID0 1318 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 FUOMA2VDF0 154 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 EIF4E1BA6NMX2 242 aaKnown RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 PRSS44E7EML9 344 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 H0Y858 1186 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 RASGRF2O14827 1237 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 RFPL1O75677 317 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 KLHL18O94889 574 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 LSM8O95777 96 aaKnown RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 CXCL10P02778 98 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 GSTA2P09210 222 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 TMEM253P0C7T8 217 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 CYP11B1P15538 503 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 HOXB8P17481 243 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 ITGB8P26012 769 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 ASPAP45381 313 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 DRG2P55039 364 aaKnown RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 TRA2BP62995 288 aaKnown RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 ADAM15Q13444 863 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 STARD3Q14849 445 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 ARHGAP44Q17R89 818 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 ANKRD20A4Q4UJ75 823 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 CASC4Q6P4E1 433 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 GJB7Q6PEY0 223 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 IL27RAQ6UWB1 636 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 SLC39A5Q6ZMH5 540 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 UNC93AQ86WB7 457 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 TMEM192Q8IY95 271 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 DEPDC4Q8N2C3 294 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 PRR18Q8N4B5 295 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 AGBL5Q8NDL9 886 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 ZNF248Q8NDW4 579 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 SLC26A7Q8TE54 656 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms