RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 H3BMM5 538 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 BTN3A3O00478 584 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 MSI1O43347 362 aaKnown RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 ASPAP45381 313 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 RAD23AP54725 363 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 SP2Q02086 613 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 EPS8Q12929 822 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 NOGQ13253 232 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 TP53BP2Q13625 1128 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 FAM98BQ52LJ0 330 aaKnown RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 PPM1LQ5SGD2 360 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 LIPMQ5VYY2 423 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 SPRYD7Q5W111 196 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 DNAJC14Q6Y2X3 702 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 STX12Q86Y82 276 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 RDH11Q8TC12 318 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 EXOC2Q96KP1 924 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 KLHL5Q96PQ7 755 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 FAM126AQ9BYI3 521 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 STN1Q9H668 368 aaKnown RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 ARHGEF4Q9NR80 690 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 PLLPQ9Y342 182 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 CCDC182A6NF36 153 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 C2P06681 752 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 CHI3L1P36222 383 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 VAC14Q08AM6 782 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 KLHL17Q6TDP4 642 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 TRMT11Q7Z4G4 463 aaKnown RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 SVOPQ8N4V2 548 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 OR7A2PQ8NGA2 310 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 TLCD1Q96CP7 247 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 SYT17Q9BSW7 474 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 ZCCHC2Q9C0B9 1178 aaKnown RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 SLC7A5P2Q9GIP4 190 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 SDCBP2Q9H190 292 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 ASB8Q9H765 288 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 FZD9O00144 591 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 SEC24AO95486 1093 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 SERPINA6P08185 405 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 VCLP18206 1134 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 DGKAP23743 735 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 TKTP29401 623 aaKnown RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 ABL2P42684 1182 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 PIK3CGP48736 1102 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 TTPAP49638 278 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 MRPS22P82650 360 aaKnown RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 IL27RAQ6UWB1 636 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 VSTM1Q6UX27 236 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 C16orf62Q7Z3J2 963 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 ZSCAN18Q8TBC5 510 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 LRRC20Q8TCA0 184 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 SPPL2BQ8TCT7 592 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 MED8Q96G25 268 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 OSGEPL1Q9H4B0 414 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 ABCB10Q9NRK6 738 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 ARL15Q9NXU5 204 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 BAZ2AQ9UIF9 1905 aaKnown RBP13.31□□□□□ -0.28
PTPRK-204ENST00000368210 A0A1W2PRG6 482 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 KPNA3O00505 521 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-204ENST00000368210 ONECUT3O60422 494 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-204ENST00000368210 LYPLA1O75608 230 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-204ENST00000368210 COX4I1P13073 169 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 PUDPQ08623 228 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 SH3D19Q5HYK7 790 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 ADGRD1Q6QNK2 874 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 USP45Q70EL2 814 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 TRIM48Q8IWZ4 208 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 OSCP1Q8WVF1 389 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 FIG4Q92562 907 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 BDH2Q9BUT1 245 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 KIF13AQ9H1H9 1805 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 ZNF142P52746 1687 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-204ENST00000368210 NT5C1B-RDH14C9J2C7 533 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 ZMPSTE24O75844 475 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 FAM155BO75949 473 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 PSMB9P28065 219 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 CLCNKBP51801 687 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 SMAD3P84022 425 aaKnown RBP13.31□□□□□ -0.28
PTPRK-204ENST00000368210 PSMD5Q16401 504 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 CRY1Q16526 586 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 TYSND1Q2T9J0 566 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 AFTPHQ6ULP2 937 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 GATAD2AQ86YP4 633 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 SPATA6LQ8N4H0 392 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 DHRSXQ8N5I4 330 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 CAB39LQ9H9S4 337 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 VPS45Q9NRW7 570 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 SH3BP4Q9P0V3 963 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 AP4B1Q9Y6B7 739 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 FOXO6A8MYZ6 492 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 LDLRP01130 860 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 FGF1P05230 155 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 MAPK8P45983 427 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 CCT8P50990 548 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 OTUD3Q5T2D3 398 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-204ENST00000368210 BNIPLQ7Z465 357 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 CCDC185Q8N715 623 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 ATAD1Q8NBU5 361 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 GMLQ99445 158 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 CLK4Q9HAZ1 481 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms