RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 C10orf88Q9H8K7 445 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 RBM22Q9NW64 420 aaKnown RBP eCLIP14.76□□□□□ -0.05
SF3B5-201ENST00000367569 DKK3Q9UBP4 350 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 ATP8A1Q9Y2Q0 1164 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 ADAMTS20P59510 1910 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 NBEAQ8NFP9 2946 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 POM121BA6NF01 834 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 MATN3O15232 486 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 TSPAN6O43657 245 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 DFNA5O60443 496 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 JCHAINP01591 159 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 C6P13671 934 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 CCNB1P14635 433 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 CTNNA1P35221 906 aaKnown RBP14.75□□□□□ -0.05
SF3B5-201ENST00000367569 IGFALSP35858 605 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 CSNK1DP48730 415 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 RENBPP51606 427 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 NXPH1P58417 271 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 CCZ1BP86790 482 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 CCZ1P86791 482 aaPredicted RBP14.75□□□□□ -0.05
SF3B5-201ENST00000367569 KIF5AQ12840 1032 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 RALGDSQ12967 914 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 IRF4Q15306 451 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 UGP2Q16851 508 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 ZNF542PQ5EBM4 170 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 TIGD7Q6NT04 549 aaPredicted RBP14.75□□□□□ -0.05
SF3B5-201ENST00000367569 C19orf48Q6RUI8 117 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 NYAP1Q6ZVC0 841 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 SLC22A18ASQ8N1D0 253 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 MAML1Q92585 1016 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 RAB7BQ96AH8 199 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 FEM1CQ96JP0 617 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 OLFM3Q96PB7 478 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 POLR1EQ9GZS1 481 aaKnown RBP14.75□□□□□ -0.05
SF3B5-201ENST00000367569 BRD8Q9H0E9 1235 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 GDF3Q9NR23 364 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 B4GALT6Q9UBX8 382 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 DMTF1Q9Y222 760 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 ADGRG1Q9Y653 693 aa14.75□□□□□ -0.05
SF3B5-201ENST00000367569 URB1O60287 2271 aaKnown RBP14.75□□□□□ -0.05
SF3B5-201ENST00000367569 ARID1BQ8NFD5 2236 aaPredicted RBP14.74□□□□□ -0.05
SF3B5-201ENST00000367569 SMG1Q96Q15 3661 aaKnown RBP14.74□□□□□ -0.05
SF3B5-201ENST00000367569 FAM149AA5PLN7 773 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 GOLGA6L3A6NEY3 463 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 BTNL10A8MVZ5 291 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 TLR4O00206 839 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 TRAFD1O14545 582 aaPredicted RBP14.74□□□□□ -0.05
SF3B5-201ENST00000367569 RIOK3O14730 519 aaKnown RBP14.74□□□□□ -0.05
SF3B5-201ENST00000367569 PCCBP05166 539 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 ALPIP09923 528 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 MX2P20592 715 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 CCNCP24863 283 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 HSPA9P38646 679 aaKnown RBP14.74□□□□□ -0.05
SF3B5-201ENST00000367569 LIG3P49916 1009 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 PPIDQ08752 370 aaKnown RBP14.74□□□□□ -0.05
SF3B5-201ENST00000367569 NIPAL4Q0D2K0 466 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 SGCGQ13326 291 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 GRM3Q14832 879 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 TCEA2Q15560 299 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 TAZQ16635 292 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 SLC45A4Q5BKX6 768 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 ERAP2Q6P179 960 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 NEK5Q6P3R8 708 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 BRAT1Q6PJG6 821 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 ZC3H18Q86VM9 953 aaKnown RBP14.74□□□□□ -0.05
SF3B5-201ENST00000367569 TEX26Q8N6G2 289 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 KIAA1524Q8TCG1 905 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 SAP25Q8TEE9 199 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 SKA1Q96BD8 255 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 ECHDC3Q96DC8 303 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 RBM41Q96IZ5 413 aaKnown RBP14.74□□□□□ -0.05
SF3B5-201ENST00000367569 ZNF641Q96N77 438 aaPredicted RBP14.74□□□□□ -0.05
SF3B5-201ENST00000367569 AGAP3Q96P47 875 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 KLF6Q99612 283 aaPredicted RBP14.74□□□□□ -0.05
SF3B5-201ENST00000367569 MBNL1Q9NR56 388 aaKnown RBP14.74□□□□□ -0.05
SF3B5-201ENST00000367569 FTSJ1Q9UET6 329 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 GUCA1BQ9UMX6 200 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 GPSM3Q9Y4H4 160 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 RAI2Q9Y5P3 530 aa14.74□□□□□ -0.05
SF3B5-201ENST00000367569 MYLKQ15746 1914 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.73□□□□□ -0.05
SF3B5-201ENST00000367569 A6NNZ2 444 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 ZNF487B1APH4 448 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 PPP1R12AO14974 1030 aaPredicted RBP14.73□□□□□ -0.05
SF3B5-201ENST00000367569 SCAMP1O15126 338 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 TM7SF2O76062 418 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 ZRANB2O95218 330 aaKnown RBP eCLIP14.73□□□□□ -0.05
SF3B5-201ENST00000367569 PDHA1P08559 390 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 CD86P42081 329 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 NSUN2Q08J23 767 aaKnown RBP eCLIP14.73□□□□□ -0.05
SF3B5-201ENST00000367569 ELP6Q0PNE2 266 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 CAMK2BQ13554 666 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 SMAD1Q15797 465 aaKnown RBP14.73□□□□□ -0.05
SF3B5-201ENST00000367569 INAVAQ3KP66 663 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 TMEM52BQ4KMG9 183 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 TFDP3Q5H9I0 405 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 CCDC181Q5TID7 509 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 DHRS13Q6UX07 377 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 Q6ZSR6 202 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 PEX26Q7Z412 305 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms