RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 RTKNQ9BST9 563 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 TBC1D10AQ9BXI6 508 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 TSPAN16Q9UKR8 245 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 C9P02748 559 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 STOMP27105 288 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 PPP3R1P63098 170 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 ZIK1Q3SY52 487 aaPredicted RBP12.48□□□□□ -0.41
TPR-201ENST00000367478 NOL9Q5SY16 702 aaKnown RBP12.48□□□□□ -0.41
TPR-201ENST00000367478 RNF19BQ6ZMZ0 732 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 AENQ8WTP8 325 aaKnown RBP12.48□□□□□ -0.41
TPR-201ENST00000367478 TELO2Q9Y4R8 837 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 PEX16Q9Y5Y5 336 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 A0A0A0MRY4 1105 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 HDAC3O15379 428 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 NUAK1O60285 661 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 IFNA7P01567 189 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 ARL3P36405 182 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 SNX20Q7Z614 316 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 OR5T3Q8NGG3 340 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 SPATA13Q96N96 652 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 PLEKHA1Q9HB21 404 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 ABCC13Q9NSE7 274 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 DAGLAQ9Y4D2 1042 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 CNTNAP2Q9UHC6 1331 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 TRMUO75648 421 aaKnown RBP12.48□□□□□ -0.41
TPR-201ENST00000367478 PRKAG1P54619 331 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 CREMQ03060 361 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 AP5B1Q2VPB7 878 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 TAPT1Q6NXT6 567 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 ZCCHC12Q6PEW1 402 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 SPATA19Q7Z5L4 167 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 JAZF1Q86VZ6 243 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 LRRC20Q8TCA0 184 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 RNF31Q96EP0 1072 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 PLCL2Q9UPR0 1127 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 NTRK1P04629 796 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 PLK1P53350 603 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 CBX3Q13185 183 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 PTF1AQ7RTS3 328 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 DNAJB14Q8TBM8 379 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 OSGEPQ9NPF4 335 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 IL1RAPQ9NPH3 570 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 HECW2Q9P2P5 1572 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 PRAMEF22A3QJZ6 481 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 TRAFD1O14545 582 aaPredicted RBP12.47□□□□□ -0.41
TPR-201ENST00000367478 GRIA4P48058 902 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 GTF2A2P52657 109 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 HERVK_113P62684 666 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 ZNF234Q14588 700 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 USF2Q15853 346 aaPredicted RBP12.47□□□□□ -0.41
TPR-201ENST00000367478 ZNF613Q6PF04 617 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 KLHL35Q6PF15 583 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 CSGALNACT1Q8TDX6 532 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 MARCH7Q9H992 704 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 OAS3Q9Y6K5 1087 aaKnown RBP12.47□□□□□ -0.41
TPR-201ENST00000367478 ENDOD1O94919 500 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 ITGAVP06756 1048 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 CLUP10909 449 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 GRSF1Q12849 480 aaKnown RBP eCLIP12.47□□□□□ -0.41
TPR-201ENST00000367478 FNBP1LQ5T0N5 605 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 C12orf56Q8IXR9 622 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 KCNIP3Q9Y2W7 256 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 PLOD2O00469 737 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 FGBP02675 491 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 BEND7Q8N7W2 519 aaPredicted RBP12.47□□□□□ -0.41
TPR-201ENST00000367478 MAP10Q9P2G4 905 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 DUSP10Q9Y6W6 482 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 KCNT2Q6UVM3 1135 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 ZNF571Q7Z3V5 609 aaPredicted RBP12.47□□□□□ -0.41
TPR-201ENST00000367478 DSELQ8IZU8 1212 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 SLC34A3Q8N130 599 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 CERS2Q96G23 380 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 OR52E6Q96RD3 313 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 XPNPEP3Q9NQH7 507 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 DDX43Q9NXZ2 648 aaKnown RBP12.47□□□□□ -0.41
TPR-201ENST00000367478 ZNF157P51786 506 aaPredicted RBP12.47□□□□□ -0.41
TPR-201ENST00000367478 RAB10P61026 200 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 PCBP1Q15365 356 aaKnown RBP eCLIP12.47□□□□□ -0.41
TPR-201ENST00000367478 POPDC2Q9HBU9 364 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 PAK6Q9NQU5 681 aaPredicted RBP12.47□□□□□ -0.41
TPR-201ENST00000367478 SOHLH2Q9NX45 425 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 ZNF639Q9UID6 485 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 PNPLA6Q8IY17 1366 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 ABHD14A-ACY1A0A1B0GW23 586 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 RIIAD1A6NNX1 92 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 DNTTP04053 509 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 DNERQ8NFT8 737 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 ELMO1Q92556 727 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 SYT15Q9BQS2 421 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 COMMD4Q9H0A8 199 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 SLC28A2O43868 658 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 CTSKP43235 329 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 FNDC3BQ53EP0 1204 aaKnown RBP12.47□□□□□ -0.41
TPR-201ENST00000367478 OMDQ99983 421 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 NINJ2Q9NZG7 142 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 SNX3O60493 162 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 OR7A10O76100 309 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 YBX3P16989 372 aaKnown RBP eCLIP12.47□□□□□ -0.418e-7■□□□□ 10.7
TPR-201ENST00000367478 HSD3B2P26439 372 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 DPYSL3Q14195 570 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms