RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 CDKN2DP55273 166 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 ADAM17P78536 824 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 CAPRIN1Q14444 709 aaKnown RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 MARC1Q5VT66 337 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 B4GALNT2Q8NHY0 566 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 ZFP28Q8NHY6 868 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 GABPB2Q8TAK5 448 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 FAM110BQ8TC76 370 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 SH3RF2Q8TEC5 729 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 TSPAN17Q96FV3 270 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 HMCESQ96FZ2 354 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 UPF3AQ9H1J1 476 aaKnown RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 NMUR1Q9HB89 426 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 MID1IP1Q9NPA3 183 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 NDUFA13Q9P0J0 144 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 MARCH4Q9P2E8 410 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 TSR3Q9UJK0 312 aaKnown RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 BTRCQ9Y297 605 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 V9GYQ6 96 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 MYADML2A6NDP7 307 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 FGF10O15520 208 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 GFAPP14136 432 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 RPL10P27635 214 aaKnown RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 CD52P31358 61 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 KCNC1P48547 511 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 RPS6KA3P51812 740 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 ZNF135P52742 658 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 EFEMP1Q12805 493 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 UPP1Q16831 310 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 DDR2Q16832 855 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 SLC39A12Q504Y0 691 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 HABP4Q5JVS0 413 aaKnown RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 RANBP10Q6VN20 620 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 B3GNT6Q6ZMB0 384 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 ZBTB49Q6ZSB9 765 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 DHFR2Q86XF0 187 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 CNTN4Q8IWV2 1026 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 TMEM102Q8N9M5 508 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 PBXIP1Q96AQ6 731 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 EFHD1Q9BUP0 239 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 KATNAL1Q9BW62 490 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 PRKD2Q9BZL6 878 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 TREX1Q9NSU2 369 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 UXTQ9UBK9 157 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 C7orf72A4D263 438 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 NCF1BA6NI72 391 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 NCF1CA8MVU1 366 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 VILLO15195 856 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 HAPLN1P10915 354 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 NCF1P14598 390 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 HSPA13P48723 471 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 PFKFB4Q16877 469 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 CROCCQ5TZA2 2017 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 LCA5Q86VQ0 697 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 LZTR1Q8N653 840 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 PTGR2Q8N8N7 351 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-202ENST00000367279 HMGCLL1Q8TB92 370 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 GRIN3AQ8TCU5 1115 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 IRGQQ8WZA9 623 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 PSMG2Q969U7 264 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 CCDC126Q96EE4 140 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 LRCH3Q96II8 777 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 FAR2Q96K12 515 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 TBATAQ96M53 351 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 KCNA7Q96RP8 456 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 TSPAN18Q96SJ8 248 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 SLC29A1Q99808 456 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 PIF1Q9H611 641 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 TRPV2Q9Y5S1 764 aa12.38□□□□□ -0.43
PTPN7-202ENST00000367279 TSC2P49815 1807 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 CNTN5O94779 1100 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 UGT1A6P19224 532 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 ADRA1AP35348 466 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 THPOP40225 353 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 GPR15P49685 360 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 CLCN5P51795 746 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 CDH15P55291 814 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 PFKPQ01813 784 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 FAM110CQ1W6H9 321 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 VPS26BQ4G0F5 336 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 RTL3Q8N8U3 475 aaKnown RBP12.37□□□□□ -0.43
PTPN7-202ENST00000367279 TSPAN14Q8NG11 270 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 TUBGCP3Q96CW5 907 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 ZFRQ96KR1 1074 aaKnown RBP12.37□□□□□ -0.43
PTPN7-202ENST00000367279 C3orf30Q96M34 536 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 HAPLN3Q96S86 360 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 PTPN18Q99952 460 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 SLC25A23Q9BV35 468 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 AGO3Q9H9G7 860 aaKnown RBP12.37□□□□□ -0.43
PTPN7-202ENST00000367279 LIN28AQ9H9Z2 209 aaKnown RBP12.37□□□□□ -0.43
PTPN7-202ENST00000367279 VPS28Q9UK41 221 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 UBFD1O14562 309 aaKnown RBP12.37□□□□□ -0.43
PTPN7-202ENST00000367279 HNRNPRO43390 633 aaKnown RBP12.37□□□□□ -0.43
PTPN7-202ENST00000367279 TBX18O95935 607 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 ZNF865P0CJ78 1059 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-202ENST00000367279 HSPA8P11142 646 aaKnown RBP12.37□□□□□ -0.43
PTPN7-202ENST00000367279 MAP2K5Q13163 448 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 GALNT3Q14435 633 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 PSMD5Q16401 504 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 AHI1Q8N157 1196 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms