RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 VWA7Q9Y334 891 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 C5orf60A6NFR6 353 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 GNSP15586 552 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 ATAD3BQ5T9A4 648 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 RNF44Q7L0R7 432 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 LUZP2Q86TE4 346 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SPATA6LQ8N4H0 392 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 ZNF398Q8TD17 642 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SMG9Q9H0W8 520 aaKnown RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 NAA20P61599 178 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 CYP4F2P78329 520 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 CERCAMQ5T4B2 595 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 OTOP3Q7RTS5 596 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SH3RF2Q8TEC5 729 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 TSC22D3Q99576 134 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 TLR9Q9NR96 1032 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SCN3BQ9NY72 215 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 XPR1Q9UBH6 696 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 A0A1W2PQ67 120 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 GUCY1B2O75343 617 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SASH3O75995 380 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SHBGP04278 402 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 CHRNB2P17787 502 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 TPSB2P20231 275 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SERPINB3P29508 390 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 S100A3P33764 101 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 TPSAB1Q15661 275 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 CDCA2Q69YH5 1023 aaPredicted RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 PIWIL2Q8TC59 973 aaKnown RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 FEM1CQ96JP0 617 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 RABGEF1Q9UJ41 708 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 NALCNQ8IZF0 1738 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 LRRC72A6NJI9 287 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 CD3EAPO15446 510 aaKnown RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 PRNPP04156 253 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 TSPAN8P19075 237 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 NOS3P29474 1203 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 TBL3Q12788 808 aaKnown RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 PRKG2Q13237 762 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SF1Q15637 639 aaKnown RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 LRRC8BQ6P9F7 803 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SNX32Q86XE0 403 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 STARD8Q92502 1023 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 GLMNQ92990 594 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 QKIQ96PU8 341 aaKnown RBP eCLIP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 NDEL1Q9GZM8 345 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SPATS2LQ9NUQ6 558 aaKnown RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 IMPAD1Q9NX62 359 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 YIPF1Q9Y548 306 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 RAI2Q9Y5P3 530 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 ANKRD26Q9UPS8 1709 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 PRMT5O14744 637 aaPredicted RBP11.62□□□□□ -0.55
SYNE1-204ENST00000367248 LRRC23Q53EV4 343 aaPredicted RBP11.62□□□□□ -0.55
SYNE1-204ENST00000367248 FNBP1LQ5T0N5 605 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 ICE2Q659A1 982 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 TMPRSS6Q8IU80 811 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 SUSD3Q96L08 255 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 RXFP1Q9HBX9 757 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 ABCB8Q9NUT2 735 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 BCLAF3A2AJT9 711 aaKnown RBP11.62□□□□□ -0.55
SYNE1-204ENST00000367248 ERAL1O75616 437 aaKnown RBP11.62□□□□□ -0.55
SYNE1-204ENST00000367248 ELP6Q0PNE2 266 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 IRGCQ6NXR0 463 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 CYP4Z1Q86W10 505 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 PYROXD2Q8N2H3 581 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 ZNF516Q92618 1163 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 ERVK-5Q9HDB9 667 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 NCDNQ9UBB6 729 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 C15orf38-AP3S2A0A0A6YYH1 394 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 RRM2P31350 389 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 CRYMQ14894 314 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 ARPINQ7Z6K5 226 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 PLD4Q96BZ4 506 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 NKX2-4Q9H2Z4 354 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 PHPT1Q9NRX4 125 aaPredicted RBP11.62□□□□□ -0.55
SYNE1-204ENST00000367248 IQCF5A8MTL0 148 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 PIAS1O75925 651 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 TBX18O95935 607 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 VHLP40337 213 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 SCTRP47872 440 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 HSPA13P48723 471 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 HNRNPDQ14103 355 aaKnown RBP11.62□□□□□ -0.55
SYNE1-204ENST00000367248 ANO7Q6IWH7 933 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 CLEC20AQ6ZU45 233 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 CHST15Q7LFX5 561 aaPredicted RBP11.62□□□□□ -0.55
SYNE1-204ENST00000367248 HEXDCQ8WVB3 486 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 TADA1Q96BN2 335 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 NSMCE2Q96MF7 247 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 RHOJQ9H4E5 214 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 GKN1Q9NS71 199 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 ENPP3O14638 875 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 MAP2K7O14733 419 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 ULK1O75385 1050 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 FGF18O76093 207 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 KCNE1P15382 129 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 GSSP48637 474 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 AP1S1P61966 158 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 POU5F2Q8N7G0 328 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 TRIB2Q92519 343 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 PRCCQ92733 491 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms