RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ITIH2P19823 946 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 SERPINB6P35237 376 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 ZNF165P49910 485 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 SRP54P61011 504 aaKnown RBP14.92□□□□□ -0.02
CTSD-202ENST00000367196 CA9Q16790 459 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 ALG11Q2TAA5 492 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 C3orf38Q5JPI3 329 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 ZNF571Q7Z3V5 609 aaPredicted RBP14.92□□□□□ -0.02
CTSD-202ENST00000367196 ARHGAP12Q8IWW6 846 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 ARL14Q8N4G2 192 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 PCDH19Q8TAB3 1148 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 NSMCE1Q8WV22 266 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 ECHDC3Q96DC8 303 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 PSKH2Q96QS6 385 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 PEBP4Q96S96 227 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 CCDC3Q9BQI4 270 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 DPH1Q9BZG8 443 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 CLPBQ9H078 707 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 CAAP1Q9H8G2 361 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 TMEM63CQ9P1W3 806 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 SATB2Q9UPW6 733 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 PCDHGA8Q9Y5G5 932 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 BZW2Q9Y6E2 419 aaKnown RBP14.92□□□□□ -0.02
CTSD-202ENST00000367196 DGKBQ9Y6T7 804 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 SHROOM3Q8TF72 1996 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 RP1P56715 2156 aa14.92□□□□□ -0.02
CTSD-202ENST00000367196 PDE2AO00408 941 aaPredicted RBP14.91□□□□□ -0.02
CTSD-202ENST00000367196 ATXN7O15265 892 aaPredicted RBP14.91□□□□□ -0.02
CTSD-202ENST00000367196 BUB1BO60566 1050 aaPredicted RBP14.91□□□□□ -0.02
CTSD-202ENST00000367196 TNFP01375 233 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 SCNN1BP51168 640 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 KIAA1024LP59773 190 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 CXADRP78310 365 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 EIF3IQ13347 325 aaKnown RBP14.91□□□□□ -0.02
CTSD-202ENST00000367196 DPYSQ14117 519 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 LBRQ14739 615 aaKnown RBP14.91□□□□□ -0.02
CTSD-202ENST00000367196 DPYSL2Q16555 572 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 TSR1Q2NL82 804 aaKnown RBP14.91□□□□□ -0.02
CTSD-202ENST00000367196 BOLA3Q53S33 107 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 TDRD12Q587J7 1177 aaKnown RBP14.91□□□□□ -0.02
CTSD-202ENST00000367196 FIGNQ5HY92 759 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 PERM1Q5SV97 790 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 CRTC1Q6UUV9 634 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 TMCO3Q6UWJ1 677 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 DPPA4Q7L190 304 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 RD3Q7Z3Z2 195 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 NPWQ8N729 165 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 WDR36Q8NI36 951 aaKnown RBP14.91□□□□□ -0.02
CTSD-202ENST00000367196 TSACCQ96A04 125 aaPredicted RBP14.91□□□□□ -0.02
CTSD-202ENST00000367196 IQCDQ96DY2 449 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 ATXN7L3BQ96GX2 97 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 SYNDIG1Q9H7V2 258 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 CWC15Q9P013 229 aaKnown RBP14.91□□□□□ -0.02
CTSD-202ENST00000367196 GULP1Q9UBP9 304 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 PNMA8BQ9ULN7 279 aaPredicted RBP14.91□□□□□ -0.02
CTSD-202ENST00000367196 GPR34Q9UPC5 381 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 OR1A2Q9Y585 309 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 ENTPD2Q9Y5L3 495 aa14.91□□□□□ -0.02
CTSD-202ENST00000367196 CCDC187A0A096LP49 1063 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 TNFRSF10CO14798 259 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 SOCS5O75159 536 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 RECQL5O94762 991 aaPredicted RBP14.9□□□□□ -0.02
CTSD-202ENST00000367196 HOXC4P09017 264 aaPredicted RBP14.9□□□□□ -0.02
CTSD-202ENST00000367196 RGRP47804 291 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 PIGHQ14442 188 aaPredicted RBP14.9□□□□□ -0.02
CTSD-202ENST00000367196 RALGPS1Q5JS13 557 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 ATPAF2Q8N5M1 289 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 ARFGAP1Q8N6T3 406 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 OR56A4Q8NGH8 313 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 SPOCK2Q92563 424 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 PDXPQ96GD0 296 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 NAF1Q96HR8 494 aaKnown RBP14.9□□□□□ -0.02
CTSD-202ENST00000367196 SLC46A1Q96NT5 459 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 BBC3Q96PG8 261 aaPredicted RBP14.9□□□□□ -0.02
CTSD-202ENST00000367196 RBM15Q96T37 977 aaKnown RBP eCLIP14.9□□□□□ -0.02
CTSD-202ENST00000367196 STRADBQ9C0K7 418 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 ISCUQ9H1K1 167 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 WDR26Q9H7D7 661 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 ASCL3Q9NQ33 180 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 SIRPGQ9P1W8 387 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 MYO1AQ9UBC5 1043 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 RAI2Q9Y5P3 530 aa14.9□□□□□ -0.02
CTSD-202ENST00000367196 COL27A1Q8IZC6 1860 aaPredicted RBP14.9□□□□□ -0.02
CTSD-202ENST00000367196 CAPN8A6NHC0 703 aa14.89□□□□□ -0.03
CTSD-202ENST00000367196 DDX3XO00571 662 aaKnown RBP eCLIP14.89□□□□□ -0.036e-21■■□□□ 12.3
CTSD-202ENST00000367196 TRAFD1O14545 582 aaPredicted RBP14.89□□□□□ -0.03
CTSD-202ENST00000367196 KRT10P13645 584 aa14.89□□□□□ -0.03
CTSD-202ENST00000367196 CDH6P55285 790 aa14.89□□□□□ -0.03
CTSD-202ENST00000367196 C19orf57Q0VDD7 668 aa14.89□□□□□ -0.03
CTSD-202ENST00000367196 RALGDSQ12967 914 aa14.89□□□□□ -0.03
CTSD-202ENST00000367196 LIPIQ6XZB0 460 aa14.89□□□□□ -0.03
CTSD-202ENST00000367196 CYP4V2Q6ZWL3 525 aaPredicted RBP14.89□□□□□ -0.03
CTSD-202ENST00000367196 ZSWIM9Q86XI8 627 aa14.89□□□□□ -0.03
CTSD-202ENST00000367196 KYQ8NBH2 561 aa14.89□□□□□ -0.03
CTSD-202ENST00000367196 TEKT4Q8WW24 435 aa14.89□□□□□ -0.03
CTSD-202ENST00000367196 SLC39A7Q92504 469 aa14.89□□□□□ -0.03
CTSD-202ENST00000367196 LIN37Q96GY3 246 aaPredicted RBP14.89□□□□□ -0.03
CTSD-202ENST00000367196 GFM1Q96RP9 751 aaKnown RBP14.89□□□□□ -0.03
CTSD-202ENST00000367196 TRIM7Q9C029 511 aa14.89□□□□□ -0.03
CTSD-202ENST00000367196 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms