RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CPXCR1Q8N123 301 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 ZNF570Q96NI8 536 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 DUX5Q96PT3 197 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 PKP4Q99569 1192 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 FUZQ9BT04 418 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 TKTL2Q9H0I9 626 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 MAGEE1Q9HCI5 957 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 SLCO3A1Q9UIG8 710 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 RCOR1Q9UKL0 485 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 ICAM5Q9UMF0 924 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 FAM96BQ9Y3D0 163 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 GREB1LQ9C091 1923 aaPredicted RBP4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 SLC16A5O15375 505 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 NCAM2O15394 837 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 TPD52L2O43399 206 aaKnown RBP4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 NDUFB4O95168 129 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 PMS2P2O95744 297 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 CYC1P08574 325 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 DAOP14920 347 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 SHMT1P34896 483 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 TLE2Q04725 743 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZRSR2Q15696 482 aaKnown RBP4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 GPR68Q15743 365 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 EIF2S3LQ2VIR3 472 aaKnown RBP4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 WDR73Q6P4I2 378 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 CUZD1Q86UP6 607 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 HTRA1Q92743 480 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 OTULINQ96BN8 352 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 PABPC5Q96DU9 382 aaKnown RBP4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 KIF1BPQ96EK5 621 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 OR1F2PQ96R84 312 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 KCNN2Q9H2S1 579 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 DONSONQ9NYP3 566 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 HCN3Q9P1Z3 774 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZNF112Q9UJU3 913 aa4.58□□□□□ -1.68
RNU4-28P-201ENST00000364739 MAGEA13PA6NCF6 341 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 PRAC2D3DTV9 90 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 TULP2O00295 520 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 HOXC11O43248 304 aaPredicted RBP4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 BUB3O43684 328 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 LDB3O75112 727 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 AGAP20933 346 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 STX2P32856 288 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 DDIT3P35638 169 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZNF155Q12901 538 aaPredicted RBP4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 CAMK1Q14012 370 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 NEDD9Q14511 834 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 CALCRLQ16602 461 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 AMZ1Q400G9 498 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZNF672Q499Z4 452 aaPredicted RBP4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 MTSS1LQ765P7 747 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZNF771Q7L3S4 317 aaPredicted RBP4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 SATL1Q86VE3 508 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 HEATR4Q86WZ0 1026 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 FOXRED2Q8IWF2 684 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZNF441Q8N8Z8 693 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 C11orf65Q8NCR3 313 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 SORCS1Q8WY21 1168 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 USP13Q92995 863 aaPredicted RBP4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 FBXL8Q96CD0 374 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 BICD1Q96G01 975 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 IL17FQ96PD4 163 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 ESRP2Q9H6T0 727 aaKnown RBP4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 BPIFA1Q9NP55 256 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 MKKSQ9NPJ1 570 aaPredicted RBP4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 PSAT1Q9Y617 370 aa4.57□□□□□ -1.68
RNU4-28P-201ENST00000364739 GAGE10A6NGK3 116 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 HNRNPCL2B2RXH8 293 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 WNT9BO14905 357 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 LDLRAD4O15165 306 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 SEC31AO94979 1220 aaKnown RBP4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 MT-CYBP00156 380 aaPredicted RBP4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 COX7A2P14406 83 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 NLRP5P59047 1200 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 SORDQ00796 357 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 RNPS1Q15287 305 aaKnown RBP4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 FAM69AQ5T7M9 428 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 TXNDC8Q6A555 127 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 LCTLQ6UWM7 567 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 NEK10Q6ZWH5 1172 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 HAPLN4Q86UW8 402 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZBTB2Q8N680 514 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 POC1AQ8NBT0 407 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 AGBL3Q8NEM8 1001 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZCCHC10Q8TBK6 192 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 TANKQ92844 425 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 RNF125Q96EQ8 232 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 KXD1Q9BQD3 176 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 HAUS8Q9BT25 410 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 GPR108Q9NPR9 543 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 CNGB3Q9NQW8 809 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 PCDHB16Q9NRJ7 776 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 KCNG2Q9UJ96 466 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 TINAGQ9UJW2 476 aa4.56□□□□□ -1.68
RNU4-28P-201ENST00000364739 ATXN2Q99700 1313 aaKnown RBP4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 MID1O15344 667 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 GRID2O43424 1007 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 PLRG1O43660 514 aaKnown RBP4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 TFP02787 698 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 MMP2P08253 660 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms