RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 CAPN5O15484 640 aaPredicted RBP13.93□□□□□ -0.18
VPS29-201ENST00000360579 PLEKP08567 350 aaPredicted RBP13.93□□□□□ -0.18
VPS29-201ENST00000360579 HOXC4P09017 264 aaPredicted RBP13.93□□□□□ -0.18
VPS29-201ENST00000360579 PNMA6AP0CW24 399 aaPredicted RBP13.93□□□□□ -0.18
VPS29-201ENST00000360579 CR2P20023 1033 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 SDC4P31431 198 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 MMP12P39900 470 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 LIG3P49916 1009 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 FOXK1P85037 733 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 B4GALNT1Q00973 533 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 SPECC1LQ69YQ0 1117 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 DNAAF5Q86Y56 855 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 PTRH1Q86Y79 214 aaKnown RBP13.93□□□□□ -0.18
VPS29-201ENST00000360579 OR1E3Q8WZA6 343 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 NKD1Q969G9 470 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 ZNF641Q96N77 438 aaPredicted RBP13.93□□□□□ -0.18
VPS29-201ENST00000360579 SUV39H2Q9H5I1 410 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 SIX2Q9NPC8 291 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 RWDD2AQ9UIY3 292 aa13.93□□□□□ -0.18
VPS29-201ENST00000360579 AJAP1Q9UKB5 411 aaPredicted RBP13.93□□□□□ -0.18
VPS29-201ENST00000360579 TMEM202A6NGA9 273 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 RHPN2P1A8MT19 583 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 FAM72CH0Y354 149 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 PDE2AO00408 941 aaPredicted RBP13.92□□□□□ -0.18
VPS29-201ENST00000360579 YBEYP58557 167 aaPredicted RBP13.92□□□□□ -0.18
VPS29-201ENST00000360579 TRA2AQ13595 282 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS29-201ENST00000360579 CDO1Q16878 200 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 SKIDA1Q1XH10 827 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 C2CD6Q53TS8 623 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 EFHC2Q5JST6 749 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 FAM72AQ5TYM5 149 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 FAM72DQ6L9T8 149 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 STRADAQ7RTN6 431 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 TMPRSS9Q7Z410 1059 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 FAM72BQ86X60 149 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 EMC1Q8N766 993 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 JPH3Q8WXH2 748 aaPredicted RBP13.92□□□□□ -0.18
VPS29-201ENST00000360579 FUBP1Q96AE4 644 aaKnown RBP13.92□□□□□ -0.18
VPS29-201ENST00000360579 ASPSCR1Q9BZE9 553 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 RDH14Q9HBH5 336 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 FGF22Q9HCT0 170 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 METTL5Q9NRN9 209 aaKnown RBP13.92□□□□□ -0.18
VPS29-201ENST00000360579 NEU3Q9UQ49 428 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 ATP8A1Q9Y2Q0 1164 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 UNC13CQ8NB66 2214 aa13.92□□□□□ -0.18
VPS29-201ENST00000360579 CLEC18AA5D8T8 446 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 ZNF891A8MT65 544 aaPredicted RBP13.91□□□□□ -0.18
VPS29-201ENST00000360579 PIGNO95427 931 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 CCL4P13236 92 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 PRKCSHP14314 528 aaPredicted RBP13.91□□□□□ -0.18
VPS29-201ENST00000360579 ALDH4A1P30038 563 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 STAT1P42224 750 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 PTPN9P43378 593 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 MTIF2P46199 727 aaKnown RBP13.91□□□□□ -0.18
VPS29-201ENST00000360579 BIRC2Q13490 618 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 PEX6Q13608 980 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 RAPGEF1Q13905 1077 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 NR1D2Q14995 579 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 C15orf59Q2T9L4 293 aaPredicted RBP13.91□□□□□ -0.18
VPS29-201ENST00000360579 AMZ1Q400G9 498 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 PARP15Q460N3 678 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 TAF3Q5VWG9 929 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 CLEC18BQ6UXF7 455 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 ZNF438Q7Z4V0 828 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 RTL3Q8N8U3 475 aaKnown RBP13.91□□□□□ -0.18
VPS29-201ENST00000360579 CLEC18CQ8NCF0 446 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 AGBL5Q8NDL9 886 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 RXFP2Q8WXD0 754 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 CPA5Q8WXQ8 436 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 NTAN1Q96AB6 310 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 TUBGCP5Q96RT8 1024 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 DPYSL5Q9BPU6 564 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 DDA1Q9BW61 102 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 MFRPQ9BY79 579 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 TMEM168Q9H0V1 697 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 WDR26Q9H7D7 661 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 CYP4F12Q9HCS2 524 aa13.91□□□□□ -0.18
VPS29-201ENST00000360579 USP9YO00507 2555 aaPredicted RBP13.91□□□□□ -0.18
VPS29-201ENST00000360579 IGHV5-10-1A0A0J9YXX1 117 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 INSIG1O15503 277 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 B4GAT1O43505 415 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 LIFP15018 202 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 EPHB2P29323 1055 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 UGT1A3P35503 534 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 TRIM23P36406 574 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 GPR3P46089 330 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 OR1D5P58170 312 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 NOMO3P69849 1222 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 NCAPHQ15003 741 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 CCDC14Q49A88 953 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 KCTD16Q68DU8 428 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 NYAP1Q6ZVC0 841 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 C17orf82Q86X59 251 aaPredicted RBP13.9□□□□□ -0.18
VPS29-201ENST00000360579 CACNA2D3Q8IZS8 1091 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 FAM26EQ8N5C1 309 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 PLA2G15Q8NCC3 412 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 RCBTB1Q8NDN9 531 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 C9orf43Q8TAL5 461 aaPredicted RBP13.9□□□□□ -0.18
VPS29-201ENST00000360579 EXOC2Q96KP1 924 aa13.9□□□□□ -0.18
VPS29-201ENST00000360579 GSDMCQ9BYG8 508 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms