RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ERVK-24P63145 666 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 ADIGQ0VDE8 80 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 SBK1Q52WX2 424 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 C1GALT1C1Q96EU7 318 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 HOPXQ9BPY8 73 aaPredicted RBP9.33□□□□□ -0.92
VPS13A-203ENST00000360280 SOHLH2Q9NX45 425 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 RAP2CQ9Y3L5 183 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 RPTORQ8N122 1335 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 IGFALSP35858 605 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 ZZZ3Q8IYH5 903 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 TNFSF13BQ9Y275 285 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 ZNF521Q96K83 1311 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 USP42Q9H9J4 1324 aaKnown RBP9.33□□□□□ -0.92
VPS13A-203ENST00000360280 SSTR1P30872 391 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 TKTL1P51854 596 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 HERVK_113P62684 666 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 GJB7Q6PEY0 223 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 P2RY8Q86VZ1 359 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 PARP8Q8N3A8 854 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 SPATA9Q9BWV2 254 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 GRHL1Q9NZI5 618 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 RFXANKO14593 260 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 ENDOD1O94919 500 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 AP2A2O94973 939 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 PTPN11Q06124 597 aaPredicted RBP9.33□□□□□ -0.92
VPS13A-203ENST00000360280 ZNF484Q5JVG2 852 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 OR52K2Q8NGK3 314 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 TESCQ96BS2 214 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 COMMD4Q9H0A8 199 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 XPNPEP3Q9NQH7 507 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 HPF1Q9NWY4 346 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 ABHD2P08910 425 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 FMO4P31512 558 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 CTXN3Q4LDR2 81 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 FAM117BQ6P1L5 589 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 DGLUCYQ7Z3D6 616 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 SPACA7Q96KW9 195 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 ZFP14Q9HCL3 533 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 MAP10Q9P2G4 905 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 RAB21Q9UL25 225 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 CNTNAP2Q9UHC6 1331 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 TGDSO95455 350 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 SLC7A2P52569 658 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 FBXO47Q5MNV8 452 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 FAM47BQ8NA70 645 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 AIF1LQ9BQI0 150 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 CUEDC1Q9NWM3 386 aaPredicted RBP9.33□□□□□ -0.92
VPS13A-203ENST00000360280 ZDHHC9Q9Y397 364 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 DDX3YO15523 660 aaKnown RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 PGRP06401 933 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 VPS26BQ4G0F5 336 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ARMC12Q5T9G4 340 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 INTS10Q9NVR2 710 aaKnown RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 DNAJA2O60884 412 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 GRK5P34947 590 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 PRR12Q9ULL5 1215 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 SAGP10523 405 aaPredicted RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 HOXC8P31273 242 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 MTHFRP42898 656 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 GRIA4P48058 902 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 THOP1P52888 689 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 TTMPQ5BVD1 217 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 GPR180Q86V85 440 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 IGDCC4Q8TDY8 1250 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 NSUN4Q96CB9 384 aaKnown RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ZNF471Q9BX82 626 aaPredicted RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 TSPAN16Q9UKR8 245 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 IFNA16P05015 189 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 GJA1P17302 382 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 CDC25CP30307 473 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 LLGL2Q6P1M3 1020 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 RXFP2Q8WXD0 754 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ELMO1Q92556 727 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 TUBGCP5Q96RT8 1024 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 USP32Q8NFA0 1604 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 NUAK1O60285 661 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 UBA1P22314 1058 aaKnown RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 VMACQ2NL98 169 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 H0YJX3 145 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 PITPNM1O00562 1244 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ABCA11PQ4W5N1 156 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 FRRS1Q6ZNA5 592 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 CERS2Q96G23 380 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 NEDD4LQ96PU5 975 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ZNF350Q9GZX5 532 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ALG9Q9H6U8 611 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 NTRK1P04629 796 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 AFF1P51825 1210 aaKnown RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 CYP4F8P98187 520 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 METTL3Q86U44 580 aaKnown RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 TRAPPC5Q8IUR0 188 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 NEO1Q92859 1461 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 RIIAD1A6NNX1 92 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 HMGCRP04035 888 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 CXorf57Q6NSI4 855 aaKnown RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 SNX20Q7Z614 316 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 PTX3P26022 381 aaPredicted RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 SEPHS1P49903 392 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ORC1Q13415 861 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 XKR6Q5GH73 641 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms