RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 UBXN4Q92575 508 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 ART4Q93070 314 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 RAB7BQ96AH8 199 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 RMDN1Q96DB5 314 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 MCCC1Q96RQ3 725 aaPredicted RBP12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 LYSMD1Q96S90 227 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 NEUROG2Q9H2A3 272 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 PRMT8Q9NR22 394 aaPredicted RBP12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 USP36Q9P275 1121 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 SERGEFQ9UGK8 458 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 PROB1E7EW31 1015 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 AP3B1O00203 1094 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 AREL1O15033 823 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 SLC7A4O43246 635 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 IGLV3-19P01714 112 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 ACADMP11310 421 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 ADRB3P13945 408 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 NBL1P41271 181 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 ABL2P42684 1182 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 TPMTP51580 245 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 CAV1Q03135 178 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 AGBL4Q5VU57 503 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 ZDHHC24Q6UX98 284 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 PPP1R21Q6ZMI0 780 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 ASCL5Q7RTU5 278 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 KBTBD6Q86V97 674 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 C1orf210Q8IVY1 113 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 IFT20Q8IY31 132 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 PGBD3Q8N328 593 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 PAF1Q8N7H5 531 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 DTWD2Q8NBA8 298 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 SERPINB12Q96P63 405 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 SMIM14Q96QK8 99 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 SRPK1Q96SB4 655 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 OMDQ99983 421 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 FRMD8Q9BZ67 464 aaPredicted RBP12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 FAM129AQ9BZQ8 928 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 ANKZF1Q9H8Y5 726 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 MAGEE1Q9HCI5 957 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 XAB2Q9HCS7 855 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 PCDH12Q9NPG4 1184 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 ZDHHC18Q9NUE0 388 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 BCCIPQ9P287 314 aaKnown RBP eCLIP12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 FZD4Q9ULV1 537 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 NCKAP1Q9Y2A7 1128 aa12.46□□□□□ -0.41
NIF3L1-201ENST00000359683 GOLGA8MH3BSY2 632 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 SPINT1O43278 529 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 LAMTOR5O43504 91 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 AP1G1O43747 822 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 RNASEH2AO75792 299 aaKnown RBP12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 TDGF1P13385 188 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 CTPS1P17812 591 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 XPAP23025 273 aaPredicted RBP12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 HNF1BP35680 557 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 MAGEA3P43357 314 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 NPY2RP49146 381 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 PLTPP55058 493 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 TAS2R38P59533 333 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 CUL1Q13616 776 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 PTPRRQ15256 657 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 CDKN3Q16667 212 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 MAML2Q8IZL2 1156 aaPredicted RBP12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 DNAAF3Q8N9W5 541 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 EPC1Q9H2F5 836 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 FADS3Q9Y5Q0 445 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 FAM186AA6NE01 2351 aa12.45□□□□□ -0.42
NIF3L1-201ENST00000359683 USP34Q70CQ2 3546 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 CCDC163A0A0D9SF12 145 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 PRR23AA6NEV1 266 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 CAPN8A6NHC0 703 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 PPFIA2O75334 1257 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 ZNF217O75362 1048 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 PRKCGP05129 697 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 ALPIP09923 528 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 CYP2A6P11509 494 aaPredicted RBP12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 TPH1P17752 444 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 NFKBIAP25963 317 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 CARSP49589 748 aaKnown RBP12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 ELP6Q0PNE2 266 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 ERCC6LQ2NKX8 1250 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 TMEM52BQ4KMG9 183 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 USP45Q70EL2 814 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 DPPA4Q7L190 304 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 CBARPQ8N350 705 aaPredicted RBP12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 ZCCHC9Q8N567 271 aaKnown RBP12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 EIF1ADQ8N9N8 165 aaKnown RBP12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 FBXO25Q8TCJ0 367 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 BRSK1Q8TDC3 778 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 GANCQ8TET4 914 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 IFT81Q8WYA0 676 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 RUBCNQ92622 972 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 CD93Q9NPY3 652 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 PIH1D1Q9NWS0 290 aaKnown RBP12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 BFARQ9NZS9 450 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 HACD3Q9P035 362 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 B4GALT6Q9UBX8 382 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 SPO11Q9Y5K1 396 aa12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 NPIPB15A6NHN6 443 aaPredicted RBP12.44□□□□□ -0.42
NIF3L1-201ENST00000359683 AXIN1O15169 862 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms