RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 TINF2Q9BSI4 451 aa20.85■□□□□ 0.93
TRIM3-202ENST00000359518 EML4Q9HC35 981 aaKnown RBP20.85■□□□□ 0.93
TRIM3-202ENST00000359518 KCTD3Q9Y597 815 aa20.85■□□□□ 0.93
TRIM3-202ENST00000359518 MYLKQ15746 1914 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 AP3B1O00203 1094 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 PSMD3O43242 534 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 FOXD2O60548 495 aaPredicted RBP20.84■□□□□ 0.93
TRIM3-202ENST00000359518 CAPNS1P04632 268 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 GEMP55040 296 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 PRKCQQ04759 706 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 KLC3Q6P597 504 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 TMEM207Q6UWW9 146 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 CARM1Q86X55 608 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 FUNDC1Q8IVP5 155 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 GAB3Q8WWW8 586 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 TMEM209Q96SK2 561 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 HAUS8Q9BT25 410 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 RALGAPA2Q2PPJ7 1873 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 ALDOCP09972 364 aaKnown RBP20.84■□□□□ 0.93
TRIM3-202ENST00000359518 SLC7A1P30825 629 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 PFKPQ01813 784 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 MFSD10Q14728 455 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 PTPRCAPQ14761 206 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 MAPRE2Q15555 327 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 ZNF786Q8N393 782 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 CBR4Q8N4T8 237 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 AFAP1L2Q8N4X5 818 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 PBXIP1Q96AQ6 731 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 SMARCD1Q96GM5 515 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 SLC25A23Q9BV35 468 aa20.84■□□□□ 0.93
TRIM3-202ENST00000359518 ADRA1AP35348 466 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 STT3AP46977 705 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 KPNA2P52292 529 aaKnown RBP20.83■□□□□ 0.93
TRIM3-202ENST00000359518 CDKN2DP55273 166 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 DNAJB13P59910 316 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 HECTD2Q5U5R9 776 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 NPLOC4Q8TAT6 608 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 DCUN1D5Q9BTE7 237 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 NT5MQ9NPB1 228 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 TMLHEQ9NVH6 421 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 LMCD1Q9NZU5 365 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 CD300AQ9UGN4 299 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 TCRBV3S1A0A5B6 114 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 H3BNH8 94 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 MATN3O15232 486 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 ZNF23P17027 643 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 TXNL4AP83876 142 aaKnown RBP20.83■□□□□ 0.93
TRIM3-202ENST00000359518 MYBPC3Q14896 1274 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 USP41Q3LFD5 358 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 SAMD4BQ5PRF9 694 aaKnown RBP20.83■□□□□ 0.93
TRIM3-202ENST00000359518 RANBP10Q6VN20 620 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 C14orf80Q86SX3 495 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 SNRNP27Q8WVK2 155 aaKnown RBP20.83■□□□□ 0.93
TRIM3-202ENST00000359518 TSGA13Q96PP4 275 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 IL12RB2Q99665 862 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 GSTO2Q9H4Y5 243 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 ENTPD7Q9NQZ7 604 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 DUS2Q9NX74 493 aaKnown RBP20.83■□□□□ 0.93
TRIM3-202ENST00000359518 SH3BP1Q9Y3L3 701 aa20.83■□□□□ 0.93
TRIM3-202ENST00000359518 CACNG3O60359 315 aa20.83■□□□□ 0.92
TRIM3-202ENST00000359518 MYL3P08590 195 aa20.83■□□□□ 0.92
TRIM3-202ENST00000359518 AXLP30530 894 aa20.83■□□□□ 0.92
TRIM3-202ENST00000359518 LHX1P48742 406 aa20.83■□□□□ 0.92
TRIM3-202ENST00000359518 SCNN1GP51170 649 aa20.83■□□□□ 0.92
TRIM3-202ENST00000359518 ARSDP51689 593 aa20.83■□□□□ 0.92
TRIM3-202ENST00000359518 TIGD5Q53EQ6 642 aa20.83■□□□□ 0.92
TRIM3-202ENST00000359518 GPR142Q7Z601 462 aa20.83■□□□□ 0.92
TRIM3-202ENST00000359518 KCNA7Q96RP8 456 aa20.83■□□□□ 0.92
TRIM3-202ENST00000359518 EFHD1Q9BUP0 239 aa20.83■□□□□ 0.92
TRIM3-202ENST00000359518 ABHD16BQ9H3Z7 469 aa20.83■□□□□ 0.92
TRIM3-202ENST00000359518 MARCH4Q9P2E8 410 aaPredicted RBP20.83■□□□□ 0.92
TRIM3-202ENST00000359518 NEU3Q9UQ49 428 aa20.83■□□□□ 0.92
TRIM3-202ENST00000359518 A0A0J9YVX5 310 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 STAMBPO95630 424 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 ADARP55265 1226 aaKnown RBP20.82■□□□□ 0.92
TRIM3-202ENST00000359518 STX1BP61266 288 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 TBCELQ5QJ74 424 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 CPNE9Q8IYJ1 553 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 FIBCD1Q8N539 461 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 PABPC5Q96DU9 382 aaKnown RBP20.82■□□□□ 0.92
TRIM3-202ENST00000359518 HSPBAP1Q96EW2 488 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 UPF3AQ9H1J1 476 aaKnown RBP20.82■□□□□ 0.92
TRIM3-202ENST00000359518 AKTIPQ9H8T0 292 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 TMEM181Q9P2C4 612 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 VWA7Q9Y334 891 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 BRCA1P38398 1863 aaKnown RBP20.82■□□□□ 0.92
TRIM3-202ENST00000359518 PDCD11Q14690 1871 aaKnown RBP20.82■□□□□ 0.92
TRIM3-202ENST00000359518 MBLAC1A4D2B0 266 aaPredicted RBP20.82■□□□□ 0.92
TRIM3-202ENST00000359518 MT-ND1P03886 318 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 CTSHP09668 335 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 CD86P42081 329 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 BRCC3P46736 316 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 FOXA1P55317 472 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 KIAA0930Q6ICG6 404 aaPredicted RBP20.82■□□□□ 0.92
TRIM3-202ENST00000359518 DDIASQ8IXT1 998 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 HDAC10Q969S8 669 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 RANBP9Q96S59 729 aa20.82■□□□□ 0.92
TRIM3-202ENST00000359518 IPO11Q9UI26 975 aaKnown RBP20.82■□□□□ 0.92
TRIM3-202ENST00000359518 CNOT11Q9UKZ1 510 aaKnown RBP20.82■□□□□ 0.92
TRIM3-202ENST00000359518 V9GYQ6 96 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms