RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 SCYL1Q96KG9 808 aa14.38□□□□□ -0.11
NIPAL3-203ENST00000358028 CNDP1Q96KN2 507 aa14.38□□□□□ -0.11
NIPAL3-203ENST00000358028 BTN2A3PQ96KV6 586 aa14.38□□□□□ -0.11
NIPAL3-203ENST00000358028 DRC3Q9H069 523 aa14.38□□□□□ -0.11
NIPAL3-203ENST00000358028 ATXN3LQ9H3M9 355 aa14.38□□□□□ -0.11
NIPAL3-203ENST00000358028 SP110Q9HB58 689 aa14.38□□□□□ -0.11
NIPAL3-203ENST00000358028 ARNT2Q9HBZ2 717 aa14.38□□□□□ -0.11
NIPAL3-203ENST00000358028 S100A14Q9HCY8 104 aa14.38□□□□□ -0.11
NIPAL3-203ENST00000358028 NT5MQ9NPB1 228 aa14.38□□□□□ -0.11
NIPAL3-203ENST00000358028 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.38□□□□□ -0.11
NIPAL3-203ENST00000358028 CPSF2Q9P2I0 782 aaKnown RBP14.38□□□□□ -0.11
NIPAL3-203ENST00000358028 RUVBL2Q9Y230 463 aaKnown RBP14.38□□□□□ -0.11
NIPAL3-203ENST00000358028 MEI4A8MW99 385 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 J3KR12 359 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 SOAT2O75908 522 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 CXCL14O95715 111 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 URODP06132 367 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 PDHA1P08559 390 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 SBK3P0C264 359 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 COX4I1P13073 169 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 NCF2P19878 526 aaPredicted RBP14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 FGFR3P22607 806 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 CRABP2P29373 138 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 CD151P48509 253 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 ARPP19P56211 112 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 RAB10P61026 200 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 XIAPP98170 497 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 SLC25A3Q00325 362 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 DSG1Q02413 1049 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 TFF2Q03403 129 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 PRKAA1Q13131 559 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 CNGA3Q16281 694 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 RTP2Q5QGT7 225 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 VWA5B1Q5TIE3 1220 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 RAP1GAP2Q684P5 730 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 LRRC8EQ6NSJ5 796 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 SETD3Q86TU7 594 aaPredicted RBP14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 MFSD6LQ8IWD5 586 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 TMEM151AQ8N4L1 468 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 SLC25A41Q8N5S1 370 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 STYXQ8WUJ0 223 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 RANBP9Q96S59 729 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 IGFLR1Q9H665 355 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 ATP13A1Q9HD20 1204 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 TLR8Q9NR97 1041 aaKnown RBP14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 STK39Q9UEW8 545 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 SCOCQ9UIL1 159 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 ACOT9Q9Y305 439 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 HEATR9A2RTY3 570 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 MAGEA13PA6NCF6 341 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 TK2O00142 265 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 MATN2O00339 956 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 HDAC3O15379 428 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 LINC01565O15544 149 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 LILRB3O75022 631 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 HAPLN1P10915 354 aaPredicted RBP14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 CPB1P15086 417 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 STMN1P16949 149 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 ITGAXP20702 1163 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 CDC25CP30307 473 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 CD86P42081 329 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 KPNA2P52292 529 aaKnown RBP14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 PGGT1BP53609 377 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 ITKQ08881 620 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 USP4Q13107 963 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 KLF10Q13118 480 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 USP41Q3LFD5 358 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 C10orf120Q5SQS8 335 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 MARC1Q5VT66 337 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 ZNF470Q6ECI4 717 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 MIB1Q86YT6 1006 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 CENPLQ8N0S6 344 aaPredicted RBP14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 POU5F2Q8N7G0 328 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 PDCD6IPQ8WUM4 868 aaKnown RBP14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 IGSF8Q969P0 613 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 ELMO2Q96JJ3 720 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 KLHL5Q96PQ7 755 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 CCDC28BQ9BUN5 200 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 TCF7L2Q9NQB0 619 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 VPS45Q9NRW7 570 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 MRPL17Q9NRX2 175 aaKnown RBP14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 COMMD8Q9NX08 183 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 MARCH2Q9P0N8 246 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 CDH22Q9UJ99 828 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 SLC27A5Q9Y2P5 690 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 IRAK3Q9Y616 596 aa14.37□□□□□ -0.11
NIPAL3-203ENST00000358028 GREB1Q4ZG55 1949 aa14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 TCF20Q9UGU0 1960 aaKnown RBP14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 SLC12A8A0AV02 714 aa14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 MTMR11A4FU01 709 aa14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 DRGXA6NNA5 263 aa14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 TBX18O95935 607 aa14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 IGLV3-27P01718 113 aa14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 MMP2P08253 660 aa14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 HMBSP08397 361 aa14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 THRAP10827 490 aa14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 PAX7P23759 505 aa14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 GLRBP48167 497 aa14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 SERPINH1P50454 418 aaKnown RBP14.36□□□□□ -0.11
NIPAL3-203ENST00000358028 RPL14P50914 215 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms