RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 RYBPQ8N488 228 aaPredicted RBP17.14■□□□□ 0.33
TPM1-205ENST00000357980 TERB1Q8NA31 727 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 ECHDC3Q96DC8 303 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 MTBPQ96DY7 904 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 LRCH3Q96II8 777 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 GAS2L1Q99501 681 aaPredicted RBP17.14■□□□□ 0.33
TPM1-205ENST00000357980 TRMT61BQ9BVS5 477 aaKnown RBP17.14■□□□□ 0.33
TPM1-205ENST00000357980 NUMBLQ9Y6R0 609 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 H3BQ06 376 aaPredicted RBP17.13■□□□□ 0.33
TPM1-205ENST00000357980 CRTAMO95727 393 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 EIF2DP41214 584 aaKnown RBP17.13■□□□□ 0.33
TPM1-205ENST00000357980 BMPR2Q13873 1038 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 PTPRRQ15256 657 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 LGSNQ5TDP6 509 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 MICALCLQ6ZW33 695 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 GLT6D1Q7Z4J2 308 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 ZSWIM9Q86XI8 627 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 SFTPA1Q8IWL2 248 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 CHST14Q8NCH0 376 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 TTC8Q8TAM2 541 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 STYXQ8WUJ0 223 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 SPOCK2Q92563 424 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 SERAC1Q96JX3 654 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 DNAJC1Q96KC8 554 aaKnown RBP17.13■□□□□ 0.33
TPM1-205ENST00000357980 RBBP8Q99708 897 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 SELENOSQ9BQE4 189 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 NSMCE4AQ9NXX6 385 aa17.13■□□□□ 0.33
TPM1-205ENST00000357980 TCF20Q9UGU0 1960 aaKnown RBP17.13■□□□□ 0.33
TPM1-205ENST00000357980 TMEM120BA0PK00 339 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 GRXCR2A6NFK2 248 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 SLC7A4O43246 635 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 BNIP3LO60238 219 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 MT-ND3P03897 115 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 KRT4P19013 534 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 NNMTP40261 264 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 EPHB1P54762 984 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 MPP2Q14168 576 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 PTPRCAPQ14761 206 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 GRM3Q14832 879 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 GRTP1Q5TC63 336 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 MROH9Q5TGP6 573 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 STRA8Q7Z7C7 330 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 CNPY4Q8N129 248 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 C4orf33Q8N1A6 199 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 TTC30BQ8N4P2 665 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 OR13C4Q8NGS5 318 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 MDM1Q8TC05 714 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 HDAC10Q969S8 669 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 SMC6Q96SB8 1091 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 MFSD1Q9H3U5 465 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 ZDHHC6Q9H6R6 413 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 MAGEE1Q9HCI5 957 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 SSU72Q9NP77 194 aaKnown RBP17.12■□□□□ 0.33
TPM1-205ENST00000357980 NLE1Q9NVX2 485 aaPredicted RBP17.12■□□□□ 0.33
TPM1-205ENST00000357980 HACD3Q9P035 362 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 TXNDC16Q9P2K2 825 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 COL4A2P08572 1712 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 ZNF106Q9H2Y7 1883 aaKnown RBP17.12■□□□□ 0.33
TPM1-205ENST00000357980 A0A0J9YYE9 177 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 CCL22O00626 93 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 PRPF4O43172 522 aaKnown RBP eCLIP17.12■□□□□ 0.333e-6■■□□□ 14.1
TPM1-205ENST00000357980 TIMM44O43615 452 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 BUD23O43709 281 aaKnown RBP17.12■□□□□ 0.33
TPM1-205ENST00000357980 RFPL1O75677 317 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 TRBC1P01850 177 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 ITGA2BP08514 1039 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 F7P08709 466 aaPredicted RBP17.12■□□□□ 0.33
TPM1-205ENST00000357980 SP100P23497 879 aaPredicted RBP17.12■□□□□ 0.33
TPM1-205ENST00000357980 ABL2P42684 1182 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 CSE1LP55060 971 aaKnown RBP17.12■□□□□ 0.33
TPM1-205ENST00000357980 PPARDQ03181 441 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 ITPRIPL2Q3MIP1 535 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 NEPROQ6NW34 567 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 TIFABQ6ZNK6 161 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 KDM1BQ8NB78 822 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 ZNF641Q96N77 438 aaPredicted RBP17.12■□□□□ 0.33
TPM1-205ENST00000357980 FAM167BQ9BTA0 163 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 SUV39H2Q9H5I1 410 aa17.12■□□□□ 0.33
TPM1-205ENST00000357980 TYROBPO43914 113 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 RPP40O75818 363 aaKnown RBP17.11■□□□□ 0.33
TPM1-205ENST00000357980 GABRB3P28472 473 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 MDH1P40925 334 aaKnown RBP17.11■□□□□ 0.33
TPM1-205ENST00000357980 SLC1A2P43004 574 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 RECQLP46063 649 aaPredicted RBP17.11■□□□□ 0.33
TPM1-205ENST00000357980 LIMK2P53671 638 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 SLC18A2Q05940 514 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 RAD51Q06609 339 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 DNAJC3Q13217 504 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 THOC5Q13769 683 aaKnown RBP17.11■□□□□ 0.33
TPM1-205ENST00000357980 ZNF470Q6ECI4 717 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 DENND6AQ8IWF6 608 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 C2CD4AQ8NCU7 369 aaPredicted RBP17.11■□□□□ 0.33
TPM1-205ENST00000357980 PTPRN2Q92932 1015 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 TBATAQ96M53 351 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 PLA2G4CQ9UP65 541 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 SLC8A2Q9UPR5 921 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 ZNF711Q9Y462 761 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 WASF2Q9Y6W5 498 aa17.11■□□□□ 0.33
TPM1-205ENST00000357980 C2orf81A6NN90 581 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms