RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 SEC31AO94979 1220 aaKnown RBP14.93□□□□□ -0.02
CCNE1-202ENST00000357943 SLU7O95391 586 aaKnown RBP14.93□□□□□ -0.02
CCNE1-202ENST00000357943 CD6P30203 668 aa14.93□□□□□ -0.02
CCNE1-202ENST00000357943 FAM193AP78312 1265 aa14.93□□□□□ -0.02
CCNE1-202ENST00000357943 CCDC15Q0P6D6 951 aa14.93□□□□□ -0.02
CCNE1-202ENST00000357943 SFSWAPQ12872 951 aaKnown RBP14.93□□□□□ -0.02
CCNE1-202ENST00000357943 USP45Q70EL2 814 aa14.93□□□□□ -0.02
CCNE1-202ENST00000357943 ZNF534Q76KX8 674 aa14.93□□□□□ -0.02
CCNE1-202ENST00000357943 PPIL6Q8IXY8 311 aa14.93□□□□□ -0.02
CCNE1-202ENST00000357943 RAB7BQ96AH8 199 aa14.93□□□□□ -0.02
CCNE1-202ENST00000357943 TOE1Q96GM8 510 aaKnown RBP14.93□□□□□ -0.02
CCNE1-202ENST00000357943 SNF8Q96H20 258 aa14.93□□□□□ -0.02
CCNE1-202ENST00000357943 MCCC1Q96RQ3 725 aaPredicted RBP14.93□□□□□ -0.02
CCNE1-202ENST00000357943 RAB17Q9H0T7 212 aa14.93□□□□□ -0.02
CCNE1-202ENST00000357943 ARNT2Q9HBZ2 717 aa14.93□□□□□ -0.02
CCNE1-202ENST00000357943 WSB2Q9NYS7 404 aaPredicted RBP14.93□□□□□ -0.02
CCNE1-202ENST00000357943 B4GALT6Q9UBX8 382 aa14.93□□□□□ -0.02
CCNE1-202ENST00000357943 ESYT3A0FGR9 886 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 CAPN8A6NHC0 703 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 GOLGA8MH3BSY2 632 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 GALR2O43603 387 aaPredicted RBP14.92□□□□□ -0.02
CCNE1-202ENST00000357943 FGF1P05230 155 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 SP9P0CG40 484 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 TPH1P17752 444 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 LHCGRP22888 699 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 MMP12P39900 470 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 ITGA8P53708 1063 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 CDK16Q00536 496 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 GUCY2DQ02846 1103 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 MTM1Q13496 603 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 GLE1Q53GS7 698 aaKnown RBP14.92□□□□□ -0.02
CCNE1-202ENST00000357943 USP39Q53GS9 565 aaKnown RBP14.92□□□□□ -0.02
CCNE1-202ENST00000357943 ERAP2Q6P179 960 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 PCGF5Q86SE9 256 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 LINC00523Q86TU6 105 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 TSPAN33Q86UF1 283 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 WDR5BQ86VZ2 330 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 LONP2Q86WA8 852 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 DNAAF3Q8N9W5 541 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 SGK2Q9HBY8 427 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 NUMA1Q14980 2115 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 PRR23AA6NEV1 266 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 NEMP1O14524 444 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 AP1G1O43747 822 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 RHOXF2BP0C7M4 288 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 OXTRP30559 389 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 SUOXP51687 545 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 ELP6Q0PNE2 266 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 CDH17Q12864 832 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 RALGDSQ12967 914 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 SRSF5Q13243 272 aaKnown RBP14.92□□□□□ -0.02
CCNE1-202ENST00000357943 MSLNQ13421 630 aaPredicted RBP14.92□□□□□ -0.02
CCNE1-202ENST00000357943 HIBCHQ6NVY1 386 aaPredicted RBP14.92□□□□□ -0.02
CCNE1-202ENST00000357943 CRTC1Q6UUV9 634 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 PPP1R21Q6ZMI0 780 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 NDUFAF2Q8N183 169 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 BLOC1S5Q8TDH9 187 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 NELL1Q92832 810 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 LYSMD1Q96S90 227 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 RHOXF2Q9BQY4 288 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 WRAP53Q9BUR4 548 aaKnown RBP14.92□□□□□ -0.02
CCNE1-202ENST00000357943 EPB41L5Q9HCM4 733 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 CASS4Q9NQ75 786 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 GRHL1Q9NZI5 618 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 MBD1Q9UIS9 605 aaPredicted RBP14.92□□□□□ -0.02
CCNE1-202ENST00000357943 SHOC2Q9UQ13 582 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 SPO11Q9Y5K1 396 aa14.92□□□□□ -0.02
CCNE1-202ENST00000357943 TBC1D3DA0A087WVF3 549 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 TBC1D3IA0A087WXS9 549 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 TBC1D3EA0A087X179 549 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 TBC1D3KA0A087X1G2 549 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 TBC1D3FA6NER0 549 aaPredicted RBP14.91□□□□□ -0.02
CCNE1-202ENST00000357943 TBC1D3LB9A6J9 549 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 AURKAO14965 403 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 AVILO75366 819 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 PCDH8O95206 1070 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 SEMA4FO95754 770 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 TBC1D3HP0C7X1 549 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 VIPR1P32241 457 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 MORF4L2Q15014 288 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 CDKN3Q16667 212 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 ZNF528Q3MIS6 628 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 TEX35Q5T0J7 233 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 TBC1D3GQ6DHY5 549 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 TBC1D3CQ6IPX1 549 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 LRRC8BQ6P9F7 803 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 DPPA4Q7L190 304 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 CAND1Q86VP6 1230 aaKnown RBP14.91□□□□□ -0.02
CCNE1-202ENST00000357943 HOOK3Q86VS8 718 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 TBC1D3Q8IZP1 549 aaPredicted RBP14.91□□□□□ -0.02
CCNE1-202ENST00000357943 MCUQ8NE86 351 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 SEC14L1Q92503 715 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 SPACA7Q96KW9 195 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 SERPINB12Q96P63 405 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 GPR174Q9BXC1 333 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 FAM126AQ9BYI3 521 aaPredicted RBP14.91□□□□□ -0.02
CCNE1-202ENST00000357943 MAGEE1Q9HCI5 957 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 ANAPC5Q9UJX4 755 aa14.91□□□□□ -0.02
CCNE1-202ENST00000357943 ZFR2Q9UPR6 939 aaKnown RBP14.91□□□□□ -0.02
CCNE1-202ENST00000357943 ZNF318Q5VUA4 2279 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms