RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 SLC35E2BP0CK96 405 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 PTPN2P17706 415 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 CACNB2Q08289 660 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-205ENST00000357568 ITGA7Q13683 1181 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 TTLL4Q14679 1199 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 NDUFA5Q16718 116 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 TBCELQ5QJ74 424 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 TMEM26Q6ZUK4 368 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 CCDC117Q8IWD4 279 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-205ENST00000357568 FSTL5Q8N475 847 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-205ENST00000357568 DHRSXQ8N5I4 330 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 MINDY1Q8N5J2 469 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 ADAM32Q8TC27 787 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 AGR3Q8TD06 166 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 CANT1Q8WVQ1 401 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 HPDLQ96IR7 371 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 GPR78Q96P69 363 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 CDT1Q9H211 546 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 TRPC7Q9HCX4 862 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 SMPD3Q9NY59 655 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-205ENST00000357568 FZD10Q9ULW2 581 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 GIT1Q9Y2X7 761 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 ACOT9Q9Y305 439 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 NDUFAF1Q9Y375 327 aa10.71□□□□□ -0.69
CAPN3-205ENST00000357568 ZNF839A8K0R7 811 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 GRAP2O75791 330 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 ITGB3P05106 788 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 JUNP05412 331 aaKnown RBP10.71□□□□□ -0.7
CAPN3-205ENST00000357568 NFICP08651 508 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 MBL2P11226 248 aaPredicted RBP10.71□□□□□ -0.7
CAPN3-205ENST00000357568 AKR1A1P14550 325 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 ELNP15502 786 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 NELFEP18615 380 aaKnown RBP10.71□□□□□ -0.7
CAPN3-205ENST00000357568 MAP4P27816 1152 aaKnown RBP10.71□□□□□ -0.7
CAPN3-205ENST00000357568 PRAMEP78395 509 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 GRM3Q14832 879 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 DLG2Q15700 870 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 FAM187BQ17R55 369 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 PMF1Q6P1K2 205 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 FKBP9P1Q75LS8 142 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 TRIM50Q86XT4 487 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 CENPLQ8N0S6 344 aaPredicted RBP10.71□□□□□ -0.7
CAPN3-205ENST00000357568 TRPV3Q8NET8 790 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 S100ZQ8WXG8 99 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 POM121Q96HA1 1249 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 SCYL1Q96KG9 808 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 PCYT2Q99447 389 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 VAT1Q99536 393 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 LGMNQ99538 433 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 CAB39LQ9H9S4 337 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 TBC1D13Q9NVG8 400 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 INTS10Q9NVR2 710 aaKnown RBP10.71□□□□□ -0.7
CAPN3-205ENST00000357568 RUVBL2Q9Y230 463 aaKnown RBP10.71□□□□□ -0.7
CAPN3-205ENST00000357568 TMEM98Q9Y2Y6 226 aa10.71□□□□□ -0.7
CAPN3-205ENST00000357568 FRMPD3Q5JV73 1810 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 ACOX3O15254 700 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 SEPT4O43236 478 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
CAPN3-205ENST00000357568 ATP6V1B2P21281 511 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 LRPAP1P30533 357 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 ACADSBP45954 432 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 ATXN3P54252 364 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-205ENST00000357568 NKX3-2P78367 333 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 ADARB1P78563 741 aaKnown RBP10.7□□□□□ -0.7
CAPN3-205ENST00000357568 RBP5P82980 135 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 POU5F1BQ06416 359 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 BNIP3Q12983 259 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 ORC1Q13415 861 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 TRIM16LQ309B1 348 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 AGKQ53H12 422 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 OGFOD2Q6N063 350 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 XKR5Q6UX68 686 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 CYP2U1Q7Z449 544 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 FBXO16Q8IX29 292 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-205ENST00000357568 SFRP1Q8N474 314 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 SLC15A4Q8N697 577 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 TRPV1Q8NER1 839 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 OR52K1Q8NGK4 314 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 TSPEARQ8WU66 669 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 AGAP2Q99490 1192 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 KIFC1Q9BW19 673 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 NANOGQ9H9S0 305 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 HMX1Q9NP08 348 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-205ENST00000357568 XPR1Q9UBH6 696 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 SLC39A10Q9ULF5 831 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 AQP9O43315 295 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 GNAO1P09471 354 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 CXCL8P10145 99 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 CD247P20963 164 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 GMPRP36959 345 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 AIF1P55008 147 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 RAB10P61026 200 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 SP4Q02446 784 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 ILF2Q12905 390 aaKnown RBP10.7□□□□□ -0.7
CAPN3-205ENST00000357568 USP10Q14694 798 aaKnown RBP10.7□□□□□ -0.7
CAPN3-205ENST00000357568 DUSP28Q4G0W2 176 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 RBM48Q5RL73 367 aaKnown RBP10.7□□□□□ -0.7
CAPN3-205ENST00000357568 TSTD2Q5T7W7 516 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 AGAP7PQ5VUJ5 663 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 BROXQ5VW32 411 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms