RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 ABI3Q9P2A4 366 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 SENP8Q96LD8 212 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 BIVM-ERCC5R4GMW8 1640 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 CAPN15O75808 1086 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 HGFP14210 728 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 CHKAP35790 457 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 PACS2Q86VP3 889 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 PSTKQ8IV42 348 aaKnown RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 ZNF615Q8N8J6 731 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 MCMBPQ9BTE3 642 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 MYO5CQ9NQX4 1742 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 LRATO95237 230 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 OTCP00480 354 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 GNALP38405 381 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 IL18Q14116 193 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 SPESP1Q6UW49 350 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 SCIMPQ6UWF3 145 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 PTGR2Q8N8N7 351 aaPredicted RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 TNFAIP8L1Q8WVP5 186 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 KCNK4Q9NYG8 393 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 MAFFQ9ULX9 164 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 ADH1CP00326 375 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 NOS2P35228 1153 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 TNS3Q68CZ2 1445 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 ZNF613Q6PF04 617 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 KLHL35Q6PF15 583 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 CHRDL2Q6WN34 429 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 UTS2BQ765I0 119 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 NRSN1Q8IZ57 195 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 PPCDCQ96CD2 204 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 TDRD1Q9BXT4 1180 aaKnown RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 BRINP2Q9C0B6 783 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 DHRS12A0PJE2 317 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 G3V2T6 193 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 CHADO15335 359 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 UBA1P22314 1058 aaKnown RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 RPL38P63173 70 aaKnown RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 METTL21AQ8WXB1 218 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 RNF208Q9H0X6 261 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 PLEKHA1Q9HB21 404 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 DNTTP04053 509 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 TCEA1P23193 301 aaKnown RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 C9orf64Q5T6V5 341 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 LIPMQ5VYY2 423 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 ELMO3Q96BJ8 720 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 C1GALT1C1Q96EU7 318 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 MOCS1Q9NZB8 636 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 RAPGEFL1Q9UHV5 662 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 ITGB1BP2Q9UKP3 347 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 SAMD4AQ9UPU9 718 aaKnown RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 E5RJQ4 531 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 NT5EP21589 574 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 C4orf46Q504U0 113 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 FNBP1LQ5T0N5 605 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 POP5Q969H6 163 aaKnown RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 AIFM2Q9BRQ8 373 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 GNEQ9Y223 722 aaKnown RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 AP1S1P61966 158 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 TMPRSS11BQ86T26 416 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 ZNF433Q8N7K0 673 aaPredicted RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 AP2M1Q96CW1 435 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 ACAT2Q9BWD1 397 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 PNPLA8Q9NP80 782 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 ZDHHC9Q9Y397 364 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 RECQL4O94761 1208 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 RASGRP1O95267 797 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 MC1RQ01726 317 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 CPSF6Q16630 551 aaKnown RBP eCLIP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 ATXN7L2Q5T6C5 722 aaPredicted RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 TCEAL6Q6IPX3 200 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 TRPV1Q8NER1 839 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 PDLIM2Q96JY6 352 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 BTRCQ9Y297 605 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 CCNB1P14635 433 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 ITGB3BPQ13352 177 aaPredicted RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 ARSJQ5FYB0 599 aaPredicted RBP5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 ADAM2Q99965 735 aa5.8□□□□□ -1.48
SRGAP1-201ENST00000355086 KELP23276 732 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 ZNF132P52740 706 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 CRADDP78560 199 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 DNAAF5Q86Y56 855 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 C11orf24Q96F05 449 aaPredicted RBP5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 WDR12Q9GZL7 423 aaKnown RBP5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 IMP3Q9NV31 184 aaKnown RBP5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 TBC1D3DA0A087WVF3 549 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 TBC1D3IA0A087WXS9 549 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 TBC1D3EA0A087X179 549 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 TBC1D3KA0A087X1G2 549 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 TBC1D3FA6NER0 549 aaPredicted RBP5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 TBC1D3LB9A6J9 549 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 LRIG2O94898 1065 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 TBC1D3HP0C7X1 549 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 TBC1D3GQ6DHY5 549 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 TBC1D3CQ6IPX1 549 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 TBC1D3Q8IZP1 549 aaPredicted RBP5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 ACTL7BQ9Y614 415 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 RPL21P46778 160 aaKnown RBP5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 FAM131AQ6UXB0 335 aa5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 CNOT6Q9ULM6 557 aaKnown RBP5.79□□□□□ -1.48
SRGAP1-201ENST00000355086 LAMC1P11047 1609 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms