RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RALGPS2Q86X27 583 aaPredicted RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 LRRC52Q8N7C0 313 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ARRDC4Q8NCT1 418 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ADCY4Q8NFM4 1077 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 MAPK15Q8TD08 544 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 RNF34Q969K3 372 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ITPKCQ96DU7 683 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 SCYL1Q96KG9 808 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 SIK2Q9H0K1 926 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 DDIT4Q9NX09 232 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 BFARQ9NZS9 450 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 SFMBT1Q9UHJ3 866 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 RIMS3Q9UJD0 308 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 BOLA1Q9Y3E2 137 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 AP4S1Q9Y587 144 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 V9GYQ6 96 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 STAU1O95793 577 aaKnown RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 JCHAINP01591 159 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 PRKCGP05129 697 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 OPRL1P41146 370 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 GARSP41250 739 aaKnown RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 ACADSBP45954 432 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 SEPHS1P49903 392 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 OCA2Q04671 838 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 TUBB3Q13509 450 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 RAB39AQ14964 217 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ZBTB6Q15916 424 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 PCSK7Q16549 785 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 TJAP1Q5JTD0 557 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 OTUD1Q5VV17 481 aaPredicted RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 RSBN1Q5VWQ0 802 aaPredicted RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 ANKRD26P1Q6NSI1 321 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 NEK10Q6ZWH5 1172 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 STRADAQ7RTN6 431 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 LYSMD3Q7Z3D4 306 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ALDH16A1Q8IZ83 802 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 PCYOX1LQ8NBM8 494 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 TNIP3Q96KP6 325 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ADAMTS10Q9H324 1103 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 COG4Q9H9E3 785 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 STAP1Q9ULZ2 295 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 MICAL3Q7RTP6 2002 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 TRIP12Q14669 1992 aaPredicted RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 A8MV72 311 aaPredicted RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 I6L893 689 aaPredicted RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 TK2O00142 265 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 PDHXO00330 501 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ZBTB14O43829 449 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 SMIM10L2AP0DMW4 78 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 SMIM10L2BP0DMW5 78 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 NFKB1P19838 968 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 PTPN3P26045 913 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 CNTFP26441 200 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 GRIA3P42263 894 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ALDH3B2P48448 385 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 HSPA13P48723 471 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 AFF1P51825 1210 aaKnown RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 LILRA4P59901 499 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 SLC13A2Q13183 592 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ZNF460Q14592 562 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 TBCCQ15814 346 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ZNF792Q3KQV3 632 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ZBED5Q49AG3 693 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 FAM117BQ6P1L5 589 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 BPHLQ86WA6 291 aaPredicted RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 CRYBG2Q8N1P7 616 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 NPWQ8N729 165 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 PNPLA1Q8N8W4 532 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 OSCP1Q8WVF1 389 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ELMO1Q92556 727 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 SGF29Q96ES7 293 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 NPAS2Q99743 824 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 BEGAINQ9BUH8 593 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 DGCR6LQ9BY27 220 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 KLHL3Q9UH77 587 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 GNPTGQ9UJJ9 305 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ZNF839A8K0R7 811 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 TREHO43280 583 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 TSPAN9O75954 239 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 ALDH1A2O94788 518 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 C2P06681 752 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 NPR3P17342 541 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 CCNA2P20248 432 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 MPSTP25325 297 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 PRDX6P30041 224 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 NOS2P35228 1153 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 STEAP4Q687X5 459 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 RWDD4Q6NW29 188 aaKnown RBP9.42□□□□□ -0.9
SMG6-202ENST00000354901 PGM2L1Q6PCE3 622 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 TIFABQ6ZNK6 161 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 KCTD8Q6ZWB6 473 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 GPRIN1Q7Z2K8 1008 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 DSELQ8IZU8 1212 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 WNT8BQ93098 351 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 FBXL20Q96IG2 436 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 HSFY1Q96LI6 401 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 ZNF560Q96MR9 790 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 OR52B2Q96RD2 323 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 APBA2Q99767 749 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 C17orf80Q9BSJ5 609 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms