RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 VPS51Q9UID3 782 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 KLRG2A4D1S0 409 aaPredicted RBP16.06■□□□□ 0.16
PTPN11-201ENST00000351677 SPATA31D3P0C874 917 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 OR1D2P34982 312 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 CLCNKBP51801 687 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 GDF10P55107 478 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 TRAF3Q13114 568 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 DGUOKQ16854 277 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 HECTD2Q5U5R9 776 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 SPATA31D4Q6ZUB0 917 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 SLC51AQ86UW1 340 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 LENG1Q96BZ8 264 aaPredicted RBP16.06■□□□□ 0.16
PTPN11-201ENST00000351677 TCHHQ07283 1943 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 SLC28A1O00337 649 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 MYL12BO14950 172 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 CREB1P16220 341 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 ICAM3P32942 547 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 NDUFV1P49821 464 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 TXNDC11Q6PKC3 985 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 CCDC149Q6ZUS6 474 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 WDR36Q8NI36 951 aaKnown RBP16.06■□□□□ 0.16
PTPN11-201ENST00000351677 MAGEC3Q8TD91 643 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 AP3M1Q9Y2T2 418 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 BTBD19C9JJ37 291 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 MYL12AP19105 171 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 MAPK8P45983 427 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 KLF10Q13118 480 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 SPATA22Q8NHS9 363 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 MFSD3Q96ES6 412 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 ARMC7Q9H6L4 198 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 RCOR3Q9P2K3 495 aaPredicted RBP16.06■□□□□ 0.16
PTPN11-201ENST00000351677 ENTPD4Q9Y227 616 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 DHRS12A0PJE2 317 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 MPP1Q00013 466 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 SP3Q02447 781 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 INO80DQ53TQ3 878 aaPredicted RBP16.06■□□□□ 0.16
PTPN11-201ENST00000351677 SAPCD2Q86UD0 394 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 RBM15BQ8NDT2 890 aaKnown RBP16.06■□□□□ 0.16
PTPN11-201ENST00000351677 CXorf40AQ8TE69 158 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 TSPAN18Q96SJ8 248 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 RTKNQ9BST9 563 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 POLR3HQ9Y535 204 aaPredicted RBP16.06■□□□□ 0.16
PTPN11-201ENST00000351677 LOC100506127A0A0U1RQW1 187 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 SHOX2O60902 331 aaPredicted RBP16.05■□□□□ 0.16
PTPN11-201ENST00000351677 TSC22D2O75157 780 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 ZNF37AP17032 561 aaPredicted RBP16.05■□□□□ 0.16
PTPN11-201ENST00000351677 HNF4AP41235 474 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 GPR1P46091 355 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 SLC5A3P53794 718 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 SLC26A9Q7LBE3 791 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 HPS6Q86YV9 775 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 RAD21L1Q9H4I0 556 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 ARHGEF4Q9NR80 690 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 ENOPH1Q9UHY7 261 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 PRPF19Q9UMS4 504 aaKnown RBP16.05■□□□□ 0.16
PTPN11-201ENST00000351677 TRIM43BA6NCK2 446 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 MED26O95402 600 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 PAICSP22234 425 aaKnown RBP16.05■□□□□ 0.16
PTPN11-201ENST00000351677 ST13P50502 369 aaKnown RBP16.05■□□□□ 0.16
PTPN11-201ENST00000351677 ZNF567Q8N184 647 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 COL26A1Q96A83 441 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 REXO5Q96IC2 774 aaKnown RBP16.05■□□□□ 0.16
PTPN11-201ENST00000351677 KLHL1Q9NR64 748 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 E9PAM4 449 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 MAGEC1O60732 1142 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 VNN1O95497 513 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 CST1P01037 141 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 IDO1P14902 403 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 ATXN1P54253 815 aaKnown RBP16.05■□□□□ 0.16
PTPN11-201ENST00000351677 SH3PXD2AQ5TCZ1 1133 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 GBA3Q9H227 469 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 CNPP09543 421 aaKnown RBP16.05■□□□□ 0.16
PTPN11-201ENST00000351677 TIGD2Q4W5G0 525 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 PDZK1Q5T2W1 519 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 ANKS1BQ7Z6G8 1248 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 ATAD3AQ9NVI7 634 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 PLK2Q9NYY3 685 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 AP4B1Q9Y6B7 739 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 FMN2Q9NZ56 1722 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 BNIP2Q12982 314 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 GRM3Q14832 879 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 OR4K2Q8NGD2 314 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 TLCD1Q96CP7 247 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 LPIN3Q9BQK8 851 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 ADAM30Q9UKF2 790 aa16.05■□□□□ 0.16
PTPN11-201ENST00000351677 COPG1Q9Y678 874 aaKnown RBP16.05■□□□□ 0.16
PTPN11-201ENST00000351677 CCL22O00626 93 aa16.04■□□□□ 0.16
PTPN11-201ENST00000351677 MSCO60682 206 aa16.04■□□□□ 0.16
PTPN11-201ENST00000351677 LMO2P25791 158 aa16.04■□□□□ 0.16
PTPN11-201ENST00000351677 MAGEA10P43363 369 aaPredicted RBP16.04■□□□□ 0.16
PTPN11-201ENST00000351677 BNIP1Q12981 228 aa16.04■□□□□ 0.16
PTPN11-201ENST00000351677 ABRAXAS1Q6UWZ7 409 aa16.04■□□□□ 0.16
PTPN11-201ENST00000351677 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.04■□□□□ 0.16
PTPN11-201ENST00000351677 ATL1Q8WXF7 558 aa16.04■□□□□ 0.16
PTPN11-201ENST00000351677 PPP1R16AQ96I34 528 aa16.04■□□□□ 0.16
PTPN11-201ENST00000351677 A0A0J9YYE9 177 aa16.04■□□□□ 0.16
PTPN11-201ENST00000351677 PIPSLA2A3N6 862 aa16.04■□□□□ 0.16
PTPN11-201ENST00000351677 C2CD4BA6NLJ0 364 aa16.04■□□□□ 0.16
PTPN11-201ENST00000351677 UNGP13051 313 aaPredicted RBP16.04■□□□□ 0.16
PTPN11-201ENST00000351677 ASTE1Q2TB18 679 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms