RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 EXT2Q93063 718 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 DACT3Q96B18 629 aaPredicted RBP6.02□□□□□ -1.45
RFC1-201ENST00000349703 ZBTB8AQ96BR9 441 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 FBXL18Q96ME1 805 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 WRNIP1Q96S55 665 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 TTYH2Q9BSA4 534 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 NXF5Q9H1B4 397 aaKnown RBP6.02□□□□□ -1.45
RFC1-201ENST00000349703 VTA1Q9NP79 307 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 ANLNQ9NQW6 1124 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 PANK4Q9NVE7 773 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 NDE1Q9NXR1 346 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 B4GALT6Q9UBX8 382 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 TFR2Q9UP52 801 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 PCDHGB5Q9Y5G0 923 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 PREX1Q8TCU6 1659 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 BTNL10A8MVZ5 291 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 CASQ2O14958 399 aaPredicted RBP6.02□□□□□ -1.45
RFC1-201ENST00000349703 SMAD9O15198 467 aaKnown RBP6.02□□□□□ -1.45
RFC1-201ENST00000349703 HAUS5O94927 633 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 GNSP15586 552 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 CHRNA4P43681 627 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 PEX3P56589 373 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 CAMK1Q14012 370 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 CYLC2Q14093 348 aaPredicted RBP6.02□□□□□ -1.45
RFC1-201ENST00000349703 HECTD3Q5T447 861 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 RAET1GQ6H3X3 334 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 TLDC1Q6P9B6 456 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 WDR59Q6PJI9 974 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 LBX2Q6XYB7 198 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 EPM2AIP1Q7L775 607 aaPredicted RBP6.02□□□□□ -1.45
RFC1-201ENST00000349703 ATG9AQ7Z3C6 839 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 GPR180Q86V85 440 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 TRIM69Q86WT6 500 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 SUPT20HQ8NEM7 779 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 TSPAN14Q8NG11 270 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 HIC2Q96JB3 615 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 SGCZQ96LD1 299 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 CCDC17Q96LX7 622 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 TMEM121BQ9BXQ6 578 aaPredicted RBP6.02□□□□□ -1.45
RFC1-201ENST00000349703 RHOBTB2Q9BYZ6 727 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 WWP1Q9H0M0 922 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 NRDE2Q9H7Z3 1164 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 TUFT1Q9NNX1 390 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 IARS2Q9NSE4 1012 aaKnown RBP6.02□□□□□ -1.45
RFC1-201ENST00000349703 ANKEF1Q9NU02 776 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 FAM118AQ9NWS6 357 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 TMCO1Q9UM00 188 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 SNX24Q9Y343 169 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 CDY2AQ9Y6F7 541 aa6.02□□□□□ -1.45
RFC1-201ENST00000349703 A0A0A6YYK5 440 aaPredicted RBP6.01□□□□□ -1.45
RFC1-201ENST00000349703 NPIPA5E9PKD4 350 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 NPIPA3F8WFD2 350 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 WRBO00258 174 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 CDC14BO60729 498 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 TOMM70O94826 608 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 LCA5LO95447 670 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 PCCAP05165 728 aaPredicted RBP6.01□□□□□ -1.45
RFC1-201ENST00000349703 CSF1RP07333 972 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 RPL17P18621 184 aaKnown RBP6.01□□□□□ -1.45
RFC1-201ENST00000349703 EPHA8P29322 1005 aaPredicted RBP6.01□□□□□ -1.45
RFC1-201ENST00000349703 CHRNA5P30532 468 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 MLH1P40692 756 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 TLE2Q04725 743 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 TBL3Q12788 808 aaKnown RBP6.01□□□□□ -1.45
RFC1-201ENST00000349703 ADAM9Q13443 819 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 DAG1Q14118 895 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 RNF43Q68DV7 783 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 ANKRD34AQ69YU3 496 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 ZNF605Q86T29 641 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 SLC41A1Q8IVJ1 513 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 SYT2Q8N9I0 419 aaPredicted RBP6.01□□□□□ -1.45
RFC1-201ENST00000349703 UHMK1Q8TAS1 419 aaKnown RBP6.01□□□□□ -1.45
RFC1-201ENST00000349703 DDI1Q8WTU0 396 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 ABTB1Q969K4 478 aaPredicted RBP6.01□□□□□ -1.45
RFC1-201ENST00000349703 CATSPER2Q96P56 530 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 GLT8D2Q9H1C3 349 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 CNTD2Q9H8S5 307 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.01□□□□□ -1.451e-6■■■□□ 15.4
RFC1-201ENST00000349703 NPIPA1Q9UND3 350 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 C3P01024 1663 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 AP4M1O00189 453 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 TXNDC9O14530 226 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 ALDH1A2O94788 518 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 SCAF4O95104 1147 aaKnown RBP6.01□□□□□ -1.45
RFC1-201ENST00000349703 MT-ND3P03897 115 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 NUDT17P0C025 328 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 COX7A2P14406 83 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 GUCY1A2P33402 732 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 PDX1P52945 283 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 FOXM1Q08050 763 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 SGSM1Q2NKQ1 1148 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 GPATCH4Q5T3I0 446 aaKnown RBP6.01□□□□□ -1.45
RFC1-201ENST00000349703 MED25Q71SY5 747 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 GPR155Q7Z3F1 870 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 LRRTM4Q86VH4 590 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.01□□□□□ -1.453e-7■■■■■ 46
RFC1-201ENST00000349703 ZFPM2Q8WW38 1151 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 COQ8BQ96D53 544 aa6.01□□□□□ -1.45
RFC1-201ENST00000349703 ZNF496Q96IT1 587 aaPredicted RBP6.01□□□□□ -1.45
RFC1-201ENST00000349703 C5orf34Q96MH7 638 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms