RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 BLOC1S5Q8TDH9 187 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 SCRN2Q96FV2 425 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 TRIM56Q9BRZ2 755 aaKnown RBP27.19■■□□□ 1.94
SSBP4-202ENST00000348495 OSBPL6Q9BZF3 934 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 MKRN2Q9H000 416 aaKnown RBP27.19■■□□□ 1.94
SSBP4-202ENST00000348495 MRM3Q9HC36 420 aaKnown RBP27.19■■□□□ 1.94
SSBP4-202ENST00000348495 LRRC4CQ9HCJ2 640 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 ARFGAP3Q9NP61 516 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 ZC3H7BQ9UGR2 993 aaKnown RBP27.19■■□□□ 1.94
SSBP4-202ENST00000348495 CAPN8A6NHC0 703 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 LDB2O43679 373 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 TTC4O95801 387 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 ALPIP09923 528 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 PSMD8P48556 350 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 CST6Q15828 149 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 FAM46CQ5VWP2 391 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 CASC4Q6P4E1 433 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 TMEM135Q86UB9 458 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 PAF1Q8N7H5 531 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 PPP1R16AQ96I34 528 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 PABPC3Q9H361 631 aaKnown RBP27.18■■□□□ 1.94
SSBP4-202ENST00000348495 CHRAC1Q9NRG0 131 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 HACD3Q9P035 362 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 SAMD15Q9P1V8 674 aa27.18■■□□□ 1.94
SSBP4-202ENST00000348495 FAM237BA0A1B0GVD1 139 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 HEATR9A2RTY3 570 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 MROH6A6NGR9 719 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 UPK3BL1B0FP48 263 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 UPK3BL2E5RIL1 263 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 RNASEH1O60930 286 aaKnown RBP27.17■■□□□ 1.94
SSBP4-202ENST00000348495 PGAM1P18669 254 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 HNF1BP35680 557 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 RPS14P62263 151 aaKnown RBP27.17■■□□□ 1.94
SSBP4-202ENST00000348495 GAS6Q14393 721 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 UAP1Q16222 522 aaPredicted RBP27.17■■□□□ 1.94
SSBP4-202ENST00000348495 CDKN3Q16667 212 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 STEAP4Q687X5 459 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 ZNF776Q68DI1 518 aaPredicted RBP27.17■■□□□ 1.94
SSBP4-202ENST00000348495 MDGA1Q8NFP4 955 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 CLDN23Q96B33 292 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 TTC25Q96NG3 672 aa27.17■■□□□ 1.94
SSBP4-202ENST00000348495 ABL2P42684 1182 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 GPX6P59796 221 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 CRY1Q16526 586 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 SPDYCQ5MJ68 293 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 UNC5AQ6ZN44 842 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 NDUFAF2Q8N183 169 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 PPHLN1Q8NEY8 458 aaKnown RBP27.16■■□□□ 1.94
SSBP4-202ENST00000348495 PJA1Q8NG27 643 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 SRPK1Q96SB4 655 aaKnown RBP27.16■■□□□ 1.94
SSBP4-202ENST00000348495 HDAC8Q9BY41 377 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 TRABDQ9H4I3 376 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 POLR3BQ9NW08 1133 aaPredicted RBP27.16■■□□□ 1.94
SSBP4-202ENST00000348495 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.16■■□□□ 1.94
SSBP4-202ENST00000348495 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.16■■□□□ 1.94
SSBP4-202ENST00000348495 NPIPB15A6NHN6 443 aaPredicted RBP27.16■■□□□ 1.94
SSBP4-202ENST00000348495 AURKAO14965 403 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 RIPK2O43353 540 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 ADH1BP00325 375 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 TSHRP16473 764 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 TAF1AQ15573 450 aaPredicted RBP27.16■■□□□ 1.94
SSBP4-202ENST00000348495 USP45Q70EL2 814 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 SYT13Q7L8C5 426 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 TTC30BQ8N4P2 665 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 ZNF778Q96MU6 729 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 ZNF711Q9Y462 761 aa27.16■■□□□ 1.94
SSBP4-202ENST00000348495 C5AR1P21730 350 aa27.15■■□□□ 1.94
SSBP4-202ENST00000348495 HSD17B3P37058 310 aa27.15■■□□□ 1.94
SSBP4-202ENST00000348495 LRRC73Q5JTD7 316 aa27.15■■□□□ 1.94
SSBP4-202ENST00000348495 PALM2Q8IXS6 379 aa27.15■■□□□ 1.94
SSBP4-202ENST00000348495 PCDH12Q9NPG4 1184 aa27.15■■□□□ 1.94
SSBP4-202ENST00000348495 TREX1Q9NSU2 369 aa27.15■■□□□ 1.94
SSBP4-202ENST00000348495 ARL5AQ9Y689 179 aa27.15■■□□□ 1.94
SSBP4-202ENST00000348495 MID1O15344 667 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 USP1O94782 785 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 PAPSS2O95340 614 aaPredicted RBP27.14■■□□□ 1.94
SSBP4-202ENST00000348495 SSTR1P30872 391 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 DRD3P35462 400 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 SIGLEC14Q08ET2 396 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 LAMB3Q13751 1172 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 SEPT6Q14141 434 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 ANKRD20A4Q4UJ75 823 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 TRIM67Q6ZTA4 783 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 ERN2Q76MJ5 926 aaKnown RBP27.14■■□□□ 1.94
SSBP4-202ENST00000348495 NLRP9Q7RTR0 991 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 GLT6D1Q7Z4J2 308 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 TTC7BQ86TV6 843 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 TMPRSS6Q8IU80 811 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 AADATQ8N5Z0 425 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 EDAQ92838 391 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 EID2BQ96D98 161 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 MFSD3Q96ES6 412 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 CFAP36Q96G28 342 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 FCRL3Q96P31 734 aaPredicted RBP27.14■■□□□ 1.94
SSBP4-202ENST00000348495 RIMKLBQ9ULI2 386 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 RPS6KL1Q9Y6S9 549 aa27.14■■□□□ 1.94
SSBP4-202ENST00000348495 SPINT1O43278 529 aa27.13■■□□□ 1.93
SSBP4-202ENST00000348495 ATG13O75143 517 aa27.13■■□□□ 1.93
SSBP4-202ENST00000348495 ACSL3O95573 720 aa27.13■■□□□ 1.93
SSBP4-202ENST00000348495 CRTAMO95727 393 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms