RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 SEMA5BQ9P283 1151 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 SIX4Q9UIU6 781 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 APPL1Q9UKG1 709 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 MYLKQ15746 1914 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 GOLGB1Q14789 3259 aaKnown RBP7.4□□□□□ -1.23
ZNF540-202ENST00000343599 ANKRD34BA5PLL1 514 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 CCDC169A6NNP5 214 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 LGALS16A8MUM7 142 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 B4E171 279 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 KCNJ18B7U540 433 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 TNFRSF10CO14798 259 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 PCDH17O14917 1159 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 XPO1O14980 1071 aaKnown RBP7.4□□□□□ -1.23
ZNF540-202ENST00000343599 NDUFS2O75306 463 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 FAM13AO94988 1023 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 TBXAS1P24557 533 aaPredicted RBP7.4□□□□□ -1.23
ZNF540-202ENST00000343599 HNRNPH3P31942 346 aaKnown RBP7.4□□□□□ -1.23
ZNF540-202ENST00000343599 TSPAN7P41732 249 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 TOB1P50616 345 aaPredicted RBP7.4□□□□□ -1.23
ZNF540-202ENST00000343599 DAB2P98082 770 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 CFHR1Q03591 330 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 UBXN1Q04323 297 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 ZNF33AQ06730 810 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 COL9A2Q14055 689 aaPredicted RBP7.4□□□□□ -1.23
ZNF540-202ENST00000343599 KCNJ12Q14500 433 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 SPA17Q15506 151 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 SIGIRRQ6IA17 410 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 RHOT2Q8IXI1 618 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 JPH3Q8WXH2 748 aaPredicted RBP7.4□□□□□ -1.23
ZNF540-202ENST00000343599 VPS16Q9H269 839 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 CRNNQ9UBG3 495 aaPredicted RBP7.4□□□□□ -1.23
ZNF540-202ENST00000343599 PPARGC1AQ9UBK2 798 aaKnown RBP7.4□□□□□ -1.23
ZNF540-202ENST00000343599 RWDD2AQ9UIY3 292 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 COQ6Q9Y2Z9 468 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 MFHAS1Q9Y4C4 1052 aa7.4□□□□□ -1.23
ZNF540-202ENST00000343599 HEATR9A2RTY3 570 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 C1QTNF9BB2RNN3 333 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 PRAMEF26H0Y7S4 382 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 NDC80O14777 642 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 KRT36O76013 467 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 C1QTNF9P0C862 333 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 GP1BBP13224 206 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 PTPN4P29074 926 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 ATP5C1P36542 298 aaKnown RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 MFAP3P55082 362 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 PEX3P56589 373 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 STX17P56962 302 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 BNC1Q01954 994 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 CYP27A1Q02318 531 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 CYP24A1Q07973 514 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 SLC39A12Q504Y0 691 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 HSP90AA5PQ58FG0 334 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 SPOPLQ6IQ16 392 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 RBM44Q6ZP01 1051 aaKnown RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 HJURPQ8NCD3 748 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 DDHD1Q8NEL9 900 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 OR7G1Q8NGA0 311 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 CEP70Q8NHQ1 597 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 CCDC110Q8TBZ0 833 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 GIPC3Q8TF64 312 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 EME1Q96AY2 570 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 MED30Q96HR3 178 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 MRGPRX1Q96LB2 322 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 HEXIM2Q96MH2 286 aaKnown RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 BIRC8Q96P09 236 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 GSDMAQ96QA5 445 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 TCF12Q99081 682 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 LRRC2Q9BYS8 371 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 UNKQ9C0B0 810 aaKnown RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 STMN4Q9H169 189 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 DDX18Q9NVP1 670 aaKnown RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 FKBP14Q9NWM8 211 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 TAB2Q9NYJ8 693 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 UVRAGQ9P2Y5 699 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 HAO1Q9UJM8 370 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 A0A1W2PQJ5 194 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 DCDC2BA2VCK2 349 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 DDX3XO00571 662 aaKnown RBP eCLIP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 C1QL1O75973 258 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 KLF8O95600 359 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 LDOC1O95751 146 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 C4BPAP04003 597 aaKnown RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 PGRP06401 933 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 CD63P08962 238 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 SMIM18P0DKX4 95 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 PABPC1P11940 636 aaKnown RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 CD46P15529 392 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 HDCP19113 662 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 SERPINB6P35237 376 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 PBX3P40426 434 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 CCR10P46092 362 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 RPL5P46777 297 aaKnown RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 ACSBG2Q5FVE4 666 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 ALKBH2Q6NS38 261 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 INTS8Q75QN2 995 aaKnown RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 RNF169Q8NCN4 708 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 CKAP2Q8WWK9 683 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 PSMB7Q99436 277 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 DDX47Q9H0S4 455 aaKnown RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 ARHGEF4Q9NR80 690 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms