RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 MAB21L3Q8N8X9 362 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 FAM156AQ8NDB6 213 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 NLGN2Q8NFZ4 835 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 OR4K2Q8NGD2 314 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 HEXDCQ8WVB3 486 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 GLMNQ92990 594 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 TMEM159Q96B96 161 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 OTULINQ96BN8 352 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 OSBPL11Q9BXB4 747 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 DNMT3LQ9UJW3 386 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 GNEQ9Y223 722 aaKnown RBP7.22□□□□□ -1.25
VCAN-202ENST00000342785 INVSQ9Y283 1065 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 SF3B1O75533 1304 aaKnown RBP eCLIP7.22□□□□□ -1.25
VCAN-202ENST00000342785 A0A0J9YYE9 177 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 ITM2AO43736 263 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 TTKP33981 857 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 NEK2P51955 445 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 IRF8Q02556 426 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 ZNF460Q14592 562 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 SPESP1Q6UW49 350 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 CDHR3Q6ZTQ4 885 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 HFE2Q6ZVN8 426 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 ADAMTSL2Q86TH1 951 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 DENND1CQ8IV53 801 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 SYTL1Q8IYJ3 562 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 ZNF276Q8N554 614 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 DENND1AQ8TEH3 1009 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 TMPRSS4Q9NRS4 437 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 WDR70Q9NW82 654 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 CNTN6Q9UQ52 1028 aa7.22□□□□□ -1.25
VCAN-202ENST00000342785 NT5C1B-RDH14C9J2C7 533 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 C9JVG2 144 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 LZTS3O60299 673 aaPredicted RBP7.21□□□□□ -1.25
VCAN-202ENST00000342785 TOP3BO95985 862 aaKnown RBP7.21□□□□□ -1.25
VCAN-202ENST00000342785 PCNAP12004 261 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 VAV1P15498 845 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 EPB42P16452 691 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 SERPINB1P30740 379 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 PIK3CGP48736 1102 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 NECAB2Q7Z6G3 386 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 CAND1Q86VP6 1230 aaKnown RBP7.21□□□□□ -1.25
VCAN-202ENST00000342785 CFAP52Q8N1V2 620 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 SFRP1Q8N474 314 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 UCMAQ8WVF2 138 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 NOL11Q9H8H0 719 aaKnown RBP7.21□□□□□ -1.25
VCAN-202ENST00000342785 ZFP14Q9HCL3 533 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 PNPLA8Q9NP80 782 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 ZNHIT2Q9UHR6 403 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 PSAT1Q9Y617 370 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 AK5Q9Y6K8 562 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 ROBO1Q9Y6N7 1651 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 SETD1AO15047 1707 aaKnown RBP7.21□□□□□ -1.25
VCAN-202ENST00000342785 E7ESA3 106 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 E9PAM4 449 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 TIPRLO75663 272 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 IGSF6O95976 241 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 F7P08709 466 aaPredicted RBP7.21□□□□□ -1.25
VCAN-202ENST00000342785 ANXA5P08758 320 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 IDO1P14902 403 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 CCDC85BQ15834 202 aaPredicted RBP7.21□□□□□ -1.25
VCAN-202ENST00000342785 ZC3H12BQ5HYM0 836 aaKnown RBP7.21□□□□□ -1.25
VCAN-202ENST00000342785 CLEC6AQ6EIG7 209 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 ARHGAP22Q7Z5H3 698 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 BBS7Q8IWZ6 715 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 EID3Q8N140 333 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 SPPL2BQ8TCT7 592 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.21□□□□□ -1.25
VCAN-202ENST00000342785 USP29Q9HBJ7 922 aa7.21□□□□□ -1.25
VCAN-202ENST00000342785 MOXD2PA6NHM9 499 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 H3BMM5 538 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 PQBP1O60828 265 aaKnown RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 PKMP14618 531 aaKnown RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 PLD1Q13393 1074 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 FBXO48Q5FWF7 155 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 ZNF621Q6ZSS3 439 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 PATL1Q86TB9 770 aaKnown RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 DCBLD1Q8N8Z6 715 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 SCAMP5Q8TAC9 235 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 PLEKHA8Q96JA3 519 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 EPB41L4BQ9H329 900 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 RRAGCQ9HB90 399 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 PNPLA3Q9NST1 481 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 TIMM22Q9Y584 194 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 RECQL5O94762 991 aaPredicted RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 STAU1O95793 577 aaKnown RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 NDST3O95803 873 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 SERPINA4P29622 427 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 MOGSQ13724 837 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 CPSF6Q16630 551 aaKnown RBP eCLIP7.21□□□□□ -1.26
VCAN-202ENST00000342785 TIGD5Q53EQ6 642 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 TSTD2Q5T7W7 516 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 KIAA0930Q6ICG6 404 aaPredicted RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 TMCO5AQ8N6Q1 288 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 UBR7Q8N806 425 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 ACTRT2Q8TDY3 377 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 RORBQ92753 470 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 MAGED4Q96JG8 741 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 UNC93B1Q9H1C4 597 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 CACNG4Q9UBN1 327 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 RGPD2P0DJD1 1756 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms