RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SEPT9Q9UHD8 586 aaPredicted RBP18.61■□□□□ 0.57
SMPD1-201ENST00000342245 PDE10AQ9Y233 779 aa18.61■□□□□ 0.57
SMPD1-201ENST00000342245 PTPRFP10586 1907 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 GAS2O43903 313 aaKnown RBP18.6■□□□□ 0.57
SMPD1-201ENST00000342245 NR2C2P49116 596 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 ACOX1Q15067 660 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 SLFN12LQ6IEE8 588 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 STRA8Q7Z7C7 330 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 ARNTL2Q8WYA1 636 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 PEBP4Q96S96 227 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 DSN1Q9H410 356 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 TASP1Q9H6P5 420 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 CISHQ9NSE2 258 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 CCDC167Q9P0B6 97 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 PRR12Q9ULL5 1215 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 NAALAD2Q9Y3Q0 740 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 PTPRJQ12913 1337 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 CENPXA8MT69 81 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 ASS1P00966 412 aaKnown RBP18.6■□□□□ 0.57
SMPD1-201ENST00000342245 ARL1P40616 181 aaPredicted RBP18.6■□□□□ 0.57
SMPD1-201ENST00000342245 GRIA1P42261 906 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 UBXN2AP68543 259 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 FAM182AQ5T1J6 154 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 TMEM179Q6ZVK1 233 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 CCDC103Q8IW40 242 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 MINDY1Q8N5J2 469 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 DYNC2LI1Q8TCX1 351 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 MCRS1Q96EZ8 462 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 AURKBQ96GD4 344 aaPredicted RBP18.6■□□□□ 0.57
SMPD1-201ENST00000342245 ELMO2Q96JJ3 720 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 CEP170P1Q96L14 293 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 IRF2BPLQ9H1B7 796 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 DHX35Q9H5Z1 703 aaKnown RBP18.6■□□□□ 0.57
SMPD1-201ENST00000342245 UBA2Q9UBT2 640 aaPredicted RBP18.6■□□□□ 0.57
SMPD1-201ENST00000342245 TLK1Q9UKI8 766 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 PCDHGB1Q9Y5G3 927 aa18.6■□□□□ 0.57
SMPD1-201ENST00000342245 DHX15O43143 795 aaKnown RBP18.59■□□□□ 0.57
SMPD1-201ENST00000342245 TPST1O60507 370 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 ATG7O95352 703 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 JUNP05412 331 aaKnown RBP18.59■□□□□ 0.57
SMPD1-201ENST00000342245 MGAT1P26572 445 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 ETV3P41162 512 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 GALK2Q01415 458 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 GALNT1Q10472 559 aaPredicted RBP18.59■□□□□ 0.57
SMPD1-201ENST00000342245 SLC13A2Q13183 592 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 DENND1BQ6P3S1 775 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 IDO2Q6ZQW0 420 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 ADAMTSL2Q86TH1 951 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 REM2Q8IYK8 340 aaPredicted RBP18.59■□□□□ 0.57
SMPD1-201ENST00000342245 SPPL2BQ8TCT7 592 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 STYXQ8WUJ0 223 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 COQ7Q99807 217 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 ZNF670Q9BS34 389 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 DGCR6LQ9BY27 220 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 ASPSCR1Q9BZE9 553 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 NIF3L1Q9GZT8 377 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 KCNH7Q9NS40 1196 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 POLLQ9UGP5 575 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 NDUFAF1Q9Y375 327 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 B4GAT1O43505 415 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 MFN2O95140 757 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 HPRP00739 348 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 MYCP01106 439 aaPredicted RBP18.59■□□□□ 0.57
SMPD1-201ENST00000342245 CHRNA1P02708 482 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 ERVK-10P10266 1014 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 POLR2CP19387 275 aaPredicted RBP18.59■□□□□ 0.57
SMPD1-201ENST00000342245 GPD1P21695 349 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 ATP2B4P23634 1241 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 ALDH3A2P51648 485 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 NEK5Q6P3R8 708 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 GABPB2Q8TAK5 448 aaPredicted RBP18.59■□□□□ 0.57
SMPD1-201ENST00000342245 HMGCLL1Q8TB92 370 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 FAM110BQ8TC76 370 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 GLMNQ92990 594 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 QKIQ96PU8 341 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMPD1-201ENST00000342245 TBCBQ99426 244 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 MEAF6Q9HAF1 191 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 ABCB10Q9NRK6 738 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 ANAPC2Q9UJX6 822 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 SPEF1Q9Y4P9 236 aa18.59■□□□□ 0.57
SMPD1-201ENST00000342245 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.58■□□□□ 0.57
SMPD1-201ENST00000342245 E2F8A0AVK6 867 aa18.58■□□□□ 0.57
SMPD1-201ENST00000342245 NDST3O95803 873 aa18.58■□□□□ 0.57
SMPD1-201ENST00000342245 S100A5P33763 92 aa18.58■□□□□ 0.57
SMPD1-201ENST00000342245 IRF9Q00978 393 aa18.58■□□□□ 0.57
SMPD1-201ENST00000342245 FOXM1Q08050 763 aa18.58■□□□□ 0.57
SMPD1-201ENST00000342245 ZFP69Q49AA0 526 aa18.58■□□□□ 0.57
SMPD1-201ENST00000342245 PIWIL4Q7Z3Z4 852 aaKnown RBP18.58■□□□□ 0.57
SMPD1-201ENST00000342245 TTLL6Q8N841 843 aa18.58■□□□□ 0.57
SMPD1-201ENST00000342245 FIG4Q92562 907 aa18.58■□□□□ 0.57
SMPD1-201ENST00000342245 CENPOQ9BU64 300 aa18.58■□□□□ 0.57
SMPD1-201ENST00000342245 ARIH1Q9Y4X5 557 aaPredicted RBP18.58■□□□□ 0.57
SMPD1-201ENST00000342245 IL4RP24394 825 aa18.58■□□□□ 0.56
SMPD1-201ENST00000342245 JAK3P52333 1124 aa18.58■□□□□ 0.56
SMPD1-201ENST00000342245 GJA9P57773 515 aa18.58■□□□□ 0.56
SMPD1-201ENST00000342245 DEFA1P59665 94 aa18.58■□□□□ 0.56
SMPD1-201ENST00000342245 DEFA3P59666 94 aa18.58■□□□□ 0.56
SMPD1-201ENST00000342245 CARTPTQ16568 116 aa18.58■□□□□ 0.56
SMPD1-201ENST00000342245 C6orf141Q5SZD1 244 aa18.58■□□□□ 0.56
SMPD1-201ENST00000342245 CCNJQ5T5M9 372 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms