RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 FAXCQ5TGI0 409 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 LRRC8EQ6NSJ5 796 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 ZNF354CQ86Y25 554 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 ANKMY2Q8IV38 441 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 APCDD1Q8J025 514 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 TERB1Q8NA31 727 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 SCRN2Q96FV2 425 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 TMEM245Q9H330 911 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 SUV39H2Q9H5I1 410 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 NKIRAS1Q9NYS0 192 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 TXNDC16Q9P2K2 825 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 NOVA2Q9UNW9 492 aaKnown RBP7.21□□□□□ -1.26
NUP43-201ENST00000340413 MAD1L1Q9Y6D9 718 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 NEDD8-MDP1E9PL57 170 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 NRG2O14511 850 aaPredicted RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 TOR1BO14657 336 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 PER2O15055 1255 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 TBX10O75333 385 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 WISP3O95389 354 aaPredicted RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 MT-ND3P03897 115 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 CHRM1P11229 460 aaPredicted RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 ITGB7P26010 798 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 MRPS21P82921 87 aaKnown RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 ELP6Q0PNE2 266 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 TRAF2Q12933 501 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 THOC5Q13769 683 aaKnown RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 CBX2Q14781 532 aaPredicted RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 HNRNPA1L2Q32P51 320 aaKnown RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 FAM46CQ5VWP2 391 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 GDPD4Q6W3E5 623 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 RIN3Q8TB24 985 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 WFDC5Q8TCV5 224 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 USP33Q8TEY7 942 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 RSPRY1Q96DX4 576 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 TRMT61BQ9BVS5 477 aaKnown RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 FAM96AQ9H5X1 160 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 DNAJC17Q9NVM6 304 aaKnown RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 ELOVL2Q9NXB9 296 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 PCDH10Q9P2E7 1040 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 ZNF711Q9Y462 761 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 GOLGA8MH3BSY2 632 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 DRD1P21728 446 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 VIPR1P32241 457 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 LTBRP36941 435 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 CD151P48509 253 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 TTPAP49638 278 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 SESN2P58004 480 aaPredicted RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 MAGOHP61326 146 aaKnown RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 NTHL1P78549 312 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 CACNG1Q06432 222 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 PRPF38BQ5VTL8 546 aaKnown RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 CLEC14AQ86T13 490 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 SPATA22Q8NHS9 363 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 ZNF398Q8TD17 642 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 VOPP1Q96AW1 172 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 MAGEB18Q96M61 343 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 VPS35Q96QK1 796 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 KDM4CQ9H3R0 1056 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 IL36AQ9UHA7 158 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 CKAP5Q14008 2032 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 AP2A2O94973 939 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 MAP3K6O95382 1288 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 MT-CYBP00156 380 aaPredicted RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 ADH1BP00325 375 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 NUDT1P36639 197 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 ITKQ08881 620 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 SPARCL1Q14515 664 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 CDKL4Q5MAI5 379 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 SPDYAQ5MJ70 313 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 UGT3A1Q6NUS8 523 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 TMC5Q6UXY8 1006 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 OR13J1Q8NGT2 312 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 OR8D1Q8WZ84 308 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 FCRL3Q96P31 734 aaPredicted RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 MYADMQ96S97 322 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 GABRG3Q99928 467 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 CAPS2Q9BXY5 557 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 NSRP1Q9H0G5 558 aaKnown RBP7.2□□□□□ -1.26
NUP43-201ENST00000340413 EPHX3Q9H6B9 360 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 IL17CQ9P0M4 197 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 GRID1Q9ULK0 1009 aa7.2□□□□□ -1.26
NUP43-201ENST00000340413 KIAA0100Q14667 2235 aaKnown RBP7.19□□□□□ -1.26
NUP43-201ENST00000340413 C1QTNF3-AMACRE9PGA6 284 aa7.19□□□□□ -1.26
NUP43-201ENST00000340413 TULP3O75386 442 aa7.19□□□□□ -1.26
NUP43-201ENST00000340413 PMPCBO75439 489 aa7.19□□□□□ -1.26
NUP43-201ENST00000340413 OPRD1P41143 372 aa7.19□□□□□ -1.26
NUP43-201ENST00000340413 IL9RQ01113 521 aa7.19□□□□□ -1.26
NUP43-201ENST00000340413 ELAVL3Q14576 367 aaKnown RBP7.19□□□□□ -1.26
NUP43-201ENST00000340413 PTPRNQ16849 979 aa7.19□□□□□ -1.26
NUP43-201ENST00000340413 ZNF805Q5CZA5 627 aa7.19□□□□□ -1.26
NUP43-201ENST00000340413 CERCAMQ5T4B2 595 aa7.19□□□□□ -1.26
NUP43-201ENST00000340413 ASTLQ6HA08 431 aaPredicted RBP7.19□□□□□ -1.26
NUP43-201ENST00000340413 NEPROQ6NW34 567 aa7.19□□□□□ -1.26
NUP43-201ENST00000340413 LEKR1Q6ZMV7 388 aa7.19□□□□□ -1.26
NUP43-201ENST00000340413 GET4Q7L5D6 327 aaPredicted RBP7.19□□□□□ -1.26
NUP43-201ENST00000340413 CKAP2Q8WWK9 683 aa7.19□□□□□ -1.26
NUP43-201ENST00000340413 SREK1Q8WXA9 508 aaKnown RBP7.19□□□□□ -1.26
NUP43-201ENST00000340413 CCDC126Q96EE4 140 aa7.19□□□□□ -1.26
NUP43-201ENST00000340413 PDLIM5Q96HC4 596 aaKnown RBP7.19□□□□□ -1.26
NUP43-201ENST00000340413 C20orf96Q9NUD7 363 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms