RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 NCKIPSDQ9NZQ3 722 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 CXXC1Q9P0U4 656 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 GIMAP2Q9UG22 337 aa10.22□□□□□ -0.77
RBFOX1-202ENST00000340209 ZBTB14O43829 449 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 OR1I1O60431 355 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 PRAMEF11O60813 436 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 ENO3P13929 434 aaPredicted RBP10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 HMGA1P17096 107 aaKnown RBP10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 WDR5P61964 334 aaKnown RBP10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 PFKFB4Q16877 469 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 FAM83EQ2M2I3 478 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 CCDC153Q494R4 210 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 RALGPS1Q5JS13 557 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 ADGRF1Q5T601 910 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 C1orf146Q5VVC0 180 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 SDCCAG8Q86SQ7 713 aaPredicted RBP10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 BBS7Q8IWZ6 715 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 DDIASQ8IXT1 998 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 CENPLQ8N0S6 344 aaPredicted RBP10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 RBM15BQ8NDT2 890 aaKnown RBP10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 ACMSDQ8TDX5 336 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 USP13Q92995 863 aaPredicted RBP10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 C1orf74Q96LT6 269 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 ATXN2Q99700 1313 aaKnown RBP10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 CADM1Q9BY67 442 aaKnown RBP10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 ZDHHC4Q9NPG8 344 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 CATSPERZQ9NTU4 200 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 LSM7Q9UK45 103 aaKnown RBP10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 CLEC4EQ9ULY5 219 aa10.21□□□□□ -0.77
RBFOX1-202ENST00000340209 TRIM43BA6NCK2 446 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 DLX3O60479 287 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 CIB2O75838 187 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 SORBS2O94875 1100 aaKnown RBP10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 CD1EP15812 388 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 KCNA5P22460 613 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 PTPN4P29074 926 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 CASP2P42575 452 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 CDKN2DP55273 166 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 NKX3-2P78367 333 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 PPM1LQ5SGD2 360 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 RGS9BPQ6ZS82 235 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 APCDD1Q8J025 514 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 OR13J1Q8NGT2 312 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 ARRDC2Q8TBH0 407 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 TRIM43Q96BQ3 446 aaPredicted RBP10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 SLC7A6OSQ96CW6 309 aaPredicted RBP10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 GPR22Q99680 433 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 IL1RL2Q9HB29 575 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 KCNK4Q9NYG8 393 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 A0A1B0GVM2 712 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 TCAF2A6NFQ2 919 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 TRIM24O15164 1050 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 SMAD6O43541 496 aaKnown RBP10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 TGM5O43548 720 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 MMP2P08253 660 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 PTPRNQ16849 979 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 SLC8B1Q6J4K2 584 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 FIBCD1Q8N539 461 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 SLC45A3Q96JT2 553 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 C7orf26Q96N11 449 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 TMEM175Q9BSA9 504 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 TCF7L2Q9NQB0 619 aa10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 POLR3BQ9NW08 1133 aaPredicted RBP10.21□□□□□ -0.78
RBFOX1-202ENST00000340209 NEDD8-MDP1E9PL57 170 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 KRT36O76013 467 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 PEX11BO96011 259 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 HOXD9P28356 352 aaPredicted RBP10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 SEL1L3Q68CR1 1132 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 MRNIPQ6NTE8 343 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 ELMOD1Q8N336 334 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 TXNDC5Q8NBS9 432 aaKnown RBP10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 GABPB2Q8TAK5 448 aaPredicted RBP10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 TOP1MTQ969P6 601 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 TMEM106CQ9BVX2 250 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 DENND2DQ9H6A0 471 aaPredicted RBP10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 TAS2R1Q9NYW7 299 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 NKX1-2Q9UD57 310 aaPredicted RBP10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 ZDHHC2Q9UIJ5 367 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 OGDHLQ9ULD0 1010 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 VWA7Q9Y334 891 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 LCHNA4D1U4 455 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 HIDE1A8MVS5 230 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 CHUKO15111 745 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 GPC4O75487 556 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 CLDN11O75508 207 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 TRIM16O95361 564 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 COL6A1P12109 1028 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 PAX3P23760 479 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 MC4RP32245 332 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 IDH3AP50213 366 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 CDH4P55283 916 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 SEMA3AQ14563 771 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 RCN1Q15293 331 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 OR4L1Q8NH43 312 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 CALML6Q8TD86 181 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 SCG3Q8WXD2 468 aaKnown RBP10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 TCEAL4Q96EI5 215 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 PRKD2Q9BZL6 878 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 PTGDR2Q9Y5Y4 395 aa10.2□□□□□ -0.78
RBFOX1-202ENST00000340209 SZT2Q5T011 3432 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms