RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 RAI2Q9Y5P3 530 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 ANKRD12Q6UB98 2062 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 AP3B1O00203 1094 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 GRM6O15303 877 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 BNIP3LO60238 219 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 BAIAP3O94812 1187 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 KRT16P08779 473 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 EPCAMP16422 314 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 CTPS1P17812 591 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 PPM1AP35813 382 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 CD151P48509 253 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 STK19P49842 368 aaPredicted RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 PLK1P53350 603 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 RAB10P61026 200 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 ATG16L1Q676U5 607 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 ALG1LQ6GMV1 187 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 ZNF549Q6P9A3 640 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 SETD3Q86TU7 594 aaPredicted RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 MFN1Q8IWA4 741 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 EFHBQ8N7U6 833 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 ZNF781Q8N8C0 355 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 MRPL43Q8N983 215 aaKnown RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 TDRD5Q8NAT2 981 aaKnown RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 LPCAT1Q8NF37 534 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 FBXO27Q8NI29 283 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 SPPL3Q8TCT6 385 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 BRSK1Q8TDC3 778 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 HEXDCQ8WVB3 486 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 SLC7A6OSQ96CW6 309 aaPredicted RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 GATA5Q9BWX5 397 aaPredicted RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 TNKS2Q9H2K2 1166 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 SCUBE2Q9NQ36 999 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 THAP1Q9NVV9 213 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 ZFP69BQ9UJL9 534 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 STOML2Q9UJZ1 356 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 TLK1Q9UKI8 766 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 STK38LQ9Y2H1 464 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 ANKRD36A6QL64 1941 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 TARM1B6A8C7 271 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 LEFTY2O00292 366 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 DLX3O60479 287 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 MOSPD3O75425 235 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 RASSF9O75901 435 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 UNC5CO95185 931 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 LUC7L3O95232 432 aaKnown RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 NDST3O95803 873 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 ALPIP09923 528 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 STMN1P16949 149 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 CA5AP35218 305 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 BMPR1AP36894 532 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 CPA2P48052 419 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 NAGLUP54802 743 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 FPGSQ05932 587 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 TEAD2Q15562 447 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 INSCQ1MX18 579 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 ASTLQ6HA08 431 aaPredicted RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 CHST9Q7L1S5 443 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 UBE2Q1Q7Z7E8 422 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 TMEM25Q86YD3 366 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 TREML1Q86YW5 311 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 CCDC117Q8IWD4 279 aaPredicted RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 PIANPQ8IYJ0 282 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 OR6Y1Q8NGX8 325 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 PTCD2Q8WV60 388 aaKnown RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 PPM1EQ8WY54 764 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 MRPS31Q92665 395 aaKnown RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 KLHL29Q96CT2 875 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 CDKN2AIPNLQ96HQ2 116 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 FEM1CQ96JP0 617 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 SCYL1Q96KG9 808 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 C7orf26Q96N11 449 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 RAD9AQ99638 391 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 TDRD1Q9BXT4 1180 aaKnown RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 MRM3Q9HC36 420 aaKnown RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 DNMT3BQ9UBC3 853 aaKnown RBP7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 GALPQ9UBC7 116 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 XPR1Q9UBH6 696 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 LHX3Q9UBR4 397 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 CDH22Q9UJ99 828 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 ACOT9Q9Y305 439 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 PCDHB9Q9Y5E1 797 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 SLC4A7Q9Y6M7 1214 aa7.43□□□□□ -1.22
SRFBP1-201ENST00000339397 ANKRD66B4E2M5 251 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 OR1I1O60431 355 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 EFCAB14O75071 495 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 SIN3BO75182 1162 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 ZNF821O75541 412 aaPredicted RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 PIGNO95427 931 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 TGDSO95455 350 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 GLUD1P00367 558 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 MPOP05164 745 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 ADH1AP07327 375 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 CCDC166P0CW27 439 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 PAMP19021 973 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 LEPRP48357 1165 aaKnown RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 CLCN4P51793 760 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 ALDH18A1P54886 795 aaKnown RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 ZBTB16Q05516 673 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 LMAN2Q12907 356 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms