RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 ZSCAN5DPP0CG00 497 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 CD27P26842 260 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 RPL26P61254 145 aaKnown RBP16.8■□□□□ 0.28
SFN-201ENST00000339276 RPS21P63220 83 aaKnown RBP16.8■□□□□ 0.28
SFN-201ENST00000339276 FGL2Q14314 439 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 PRPSAP1Q14558 356 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 CCDC6Q16204 474 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 QPCTQ16769 361 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 PARP6Q2NL67 630 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 USP45Q70EL2 814 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 ASCL5Q7RTU5 278 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 GSTA5Q7RTV2 222 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 CCDC89Q8N998 374 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 RMDN1Q96DB5 314 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 SCRN2Q96FV2 425 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 FEM1CQ96JP0 617 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 MCCC1Q96RQ3 725 aaPredicted RBP16.8■□□□□ 0.28
SFN-201ENST00000339276 GMEB2Q9UKD1 530 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 PILRBQ9UKJ0 227 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 RPL26L1Q9UNX3 145 aaKnown RBP16.8■□□□□ 0.28
SFN-201ENST00000339276 PPIL1Q9Y3C6 166 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 TRPM6Q9BX84 2022 aa16.8■□□□□ 0.28
SFN-201ENST00000339276 A0A0U1RQS6 177 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 CAPN8A6NHC0 703 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 ANXA9O76027 345 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 LHCGRP22888 699 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 VIPR1P32241 457 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 HNF1BP35680 557 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 COILP38432 576 aaPredicted RBP16.79■□□□□ 0.28
SFN-201ENST00000339276 MPLP40238 635 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 GRIA4P48058 902 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 LIG3P49916 1009 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 GEMP55040 296 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 OLIG2Q13516 323 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 CCDC137Q6PK04 289 aaKnown RBP16.79■□□□□ 0.28
SFN-201ENST00000339276 TSPAN33Q86UF1 283 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 SYT12Q8IV01 421 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 ZCCHC9Q8N567 271 aaKnown RBP16.79■□□□□ 0.28
SFN-201ENST00000339276 C1orf216Q8TAB5 229 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 FICDQ9BVA6 458 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 ADGRE3Q9BY15 652 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 FZD3Q9NPG1 666 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 NCDNQ9UBB6 729 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 COQ6Q9Y2Z9 468 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 GON4LQ3T8J9 2241 aa16.79■□□□□ 0.28
SFN-201ENST00000339276 LOC285095A0A1B0GVY8 99 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 ANKRD66B4E2M5 251 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 SLC31A1O15431 190 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 NDST3O95803 873 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 ATXN1LP0C7T5 689 aaKnown RBP16.78■□□□□ 0.28
SFN-201ENST00000339276 ELFN1P0C7U0 828 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 PIRTP0C851 137 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 CYP2A6P11509 494 aaPredicted RBP16.78■□□□□ 0.28
SFN-201ENST00000339276 C6P13671 934 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 RPL22P35268 128 aaKnown RBP16.78■□□□□ 0.28
SFN-201ENST00000339276 CHRNA4P43681 627 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 CNGA3Q16281 694 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 SETMARQ53H47 684 aaPredicted RBP16.78■□□□□ 0.28
SFN-201ENST00000339276 PEAR1Q5VY43 1037 aaPredicted RBP16.78■□□□□ 0.28
SFN-201ENST00000339276 LIPIQ6XZB0 460 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 KLHDC8BQ8IXV7 354 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 NDUFAF2Q8N183 169 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 SLC25A41Q8N5S1 370 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 ATL2Q8NHH9 583 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 SLC6A18Q96N87 628 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 MYOCQ99972 504 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 C1QTNF2Q9BXJ5 285 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 FSD1LQ9BXM9 530 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 SLC17A9Q9BYT1 436 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 DDX47Q9H0S4 455 aaKnown RBP16.78■□□□□ 0.28
SFN-201ENST00000339276 SMOC1Q9H4F8 434 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 TPX2Q9ULW0 747 aaKnown RBP16.78■□□□□ 0.28
SFN-201ENST00000339276 AAR2Q9Y312 384 aaKnown RBP16.78■□□□□ 0.28
SFN-201ENST00000339276 PCDHGA5Q9Y5G8 931 aa16.78■□□□□ 0.28
SFN-201ENST00000339276 PATE3B3GLJ2 98 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 WNT9AO14904 365 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 TM7SF2O76062 418 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 HEXIM1O94992 359 aaKnown RBP16.77■□□□□ 0.28
SFN-201ENST00000339276 AGTP01019 485 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 NFKBIAP25963 317 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 ACTN2P35609 894 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 PAFAH1B1P43034 410 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 FNTAP49354 379 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 SPARCL1Q14515 664 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 SIRPB2Q5JXA9 342 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 LRRC66Q68CR7 880 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 DENND2CQ68D51 928 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 CRTC1Q6UUV9 634 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 ZSCAN30Q86W11 494 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 DCLK2Q8N568 766 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 ZNF592Q92610 1267 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 SERAC1Q96JX3 654 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 PPP1R2P1Q96PQ5 205 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 APOL2Q9BQE5 337 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 ETNK1Q9HBU6 452 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 TM9SF3Q9HD45 589 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 PAK5Q9P286 719 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 RNF14Q9UBS8 474 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 DMTF1Q9Y222 760 aa16.77■□□□□ 0.28
SFN-201ENST00000339276 CA5BQ9Y2D0 317 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms