RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ENKURQ8TC29 256 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 SERHL2Q9H4I8 314 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 SYNDIG1Q9H7V2 258 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 SERHLQ9NQF3 203 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 GNPTGQ9UJJ9 305 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 TBC1D30Q9Y2I9 924 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 DPPA5A6NC42 116 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 TRIM43BA6NCK2 446 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 SEC24AO95486 1093 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 FEN1P39748 380 aaKnown RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 MAGEA10P43363 369 aaPredicted RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 CRYBB1P53674 252 aaPredicted RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 LIN52Q52LA3 116 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 ZCCHC8Q6NZY4 707 aaKnown RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 NXNL1Q96CM4 212 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 NTPCRQ9BSD7 190 aaKnown RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 BCAS3Q9H6U6 928 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 GNEQ9Y223 722 aaKnown RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 CAMTA1Q9Y6Y1 1673 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 PAGE1O75459 146 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 CYP2A6P11509 494 aaPredicted RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 PTPN3P26045 913 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 ITGA1P56199 1179 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 WDR4P57081 412 aaKnown RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 MRPS6P82932 125 aaKnown RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 BTG3Q14201 252 aaPredicted RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 TRAPPC5Q8IUR0 188 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 NIFKQ9BYG3 293 aaKnown RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 DERAQ9Y315 318 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 PCDHB12Q9Y5F1 795 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 KIF1AQ12756 1690 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 IGKV6D-41A0A0C4DH26 115 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 DYTNA2CJ06 578 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 C5orf60A6NFR6 353 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 GPR25O00155 361 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 PRKCQQ04759 706 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 GALNT3Q14435 633 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 NR1D2Q14995 579 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 PLCL1Q15111 1095 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 PABPC1LQ4VXU2 614 aaKnown RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 PAGE2BQ5JRK9 111 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 OTOP3Q7RTS5 596 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 MON1AQ86VX9 555 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 NDRG1Q92597 394 aaKnown RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 FADS3Q9Y5Q0 445 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 MRC1P22897 1456 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 SLIT3O75094 1523 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 TSPAN19P0C672 248 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 LIMK2P53671 638 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 ZNF57Q68EA5 555 aaPredicted RBP13.79□□□□□ -0.2
RTN4-202ENST00000337526 DCLRE1AQ6PJP8 1040 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 VSTM1Q6UX27 236 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 BANPQ8N9N5 519 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 EPB41L1Q9H4G0 881 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 XPNPEP1Q9NQW7 623 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 ARHGEF3Q9NR81 526 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 RPS6KB2Q9UBS0 482 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 PCDHB9Q9Y5E1 797 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 MANSC4A6NHS7 340 aaPredicted RBP13.79□□□□□ -0.2
RTN4-202ENST00000337526 ZNF37AP17032 561 aaPredicted RBP13.79□□□□□ -0.2
RTN4-202ENST00000337526 RALGDSQ12967 914 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 GRM3Q14832 879 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 SETMARQ53H47 684 aaPredicted RBP13.79□□□□□ -0.2
RTN4-202ENST00000337526 DENND1CQ8IV53 801 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 TBC1D21Q8IYX1 336 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 KLRG1Q96E93 195 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 LINGO1Q96FE5 620 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 REXO5Q96IC2 774 aaKnown RBP13.79□□□□□ -0.2
RTN4-202ENST00000337526 KCTD15Q96SI1 283 aaPredicted RBP13.79□□□□□ -0.2
RTN4-202ENST00000337526 GATA5Q9BWX5 397 aaPredicted RBP13.79□□□□□ -0.2
RTN4-202ENST00000337526 OSBPL10Q9BXB5 764 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 ARHGEF4Q9NR80 690 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 AP2A1O95782 977 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 PGK1P00558 417 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 C4BPBP20851 252 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 BRCC3P46736 316 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 CYP2A13Q16696 494 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 UBASH3BQ8TF42 649 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 ELMO1Q92556 727 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 MRPL48Q96GC5 212 aaKnown RBP13.79□□□□□ -0.2
RTN4-202ENST00000337526 QKIQ96PU8 341 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■■■■■ 69
RTN4-202ENST00000337526 SPRTNQ9H040 489 aaPredicted RBP13.79□□□□□ -0.2
RTN4-202ENST00000337526 FAM105AQ9NUU6 356 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 PQBP1O60828 265 aaKnown RBP13.79□□□□□ -0.2
RTN4-202ENST00000337526 EIF2S1P05198 315 aaKnown RBP13.79□□□□□ -0.2
RTN4-202ENST00000337526 CDC42P60953 191 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 CCDC149Q6ZUS6 474 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 LPGAT1Q92604 370 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 UROC1Q96N76 676 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 DEPDC7Q96QD5 511 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 OR52E6Q96RD3 313 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 PANX1Q96RD7 426 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 CCDC28BQ9BUN5 200 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 DMTF1Q9Y222 760 aa13.79□□□□□ -0.2
RTN4-202ENST00000337526 SAMHD1Q9Y3Z3 626 aaKnown RBP13.79□□□□□ -0.2
RTN4-202ENST00000337526 C2CD4BA6NLJ0 364 aa13.78□□□□□ -0.2
RTN4-202ENST00000337526 TLR5O60602 858 aa13.78□□□□□ -0.2
RTN4-202ENST00000337526 GCATO75600 419 aa13.78□□□□□ -0.2
RTN4-202ENST00000337526 PTPN9P43378 593 aa13.78□□□□□ -0.2
RTN4-202ENST00000337526 MAPK8P45983 427 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms