RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 KANSL1LA0AUZ9 987 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 TRIM38O00635 465 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 PTGESO14684 152 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 CASQ2O14958 399 aaPredicted RBP16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 PRKAA2P54646 552 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 GEMP55040 296 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 PDCD4Q53EL6 469 aaKnown RBP16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 LRRC43Q8N309 656 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 KDM1BQ8NB78 822 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 SMG8Q8ND04 991 aaKnown RBP16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 LPGAT1Q92604 370 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 MYLPFQ96A32 169 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 PAAF1Q9BRP4 392 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 TMEM79Q9BSE2 394 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 EFHD1Q9BUP0 239 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 KIFC1Q9BW19 673 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 ALG9Q9H6U8 611 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 NT5MQ9NPB1 228 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 N6AMT1Q9Y5N5 214 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 ARHGAP10A1A4S6 786 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 MZF1P28698 734 aaPredicted RBP16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 GJA5P36382 358 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 CASP2P42575 452 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 RPL34P49207 117 aaKnown RBP16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 IQSEC1Q6DN90 963 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 DCLRE1AQ6PJP8 1040 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 TLK2Q86UE8 772 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 PPP1R14BQ96C90 147 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 COQ10BQ9H8M1 238 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 TTC24A2A3L6 582 aaPredicted RBP16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 HEATR9A2RTY3 570 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 TMX2-CTNND1H3BSU7 103 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 MRASO14807 208 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 SMIM18P0DKX4 95 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 PCSK1P29120 753 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 ETFBP38117 255 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 AIF1P55008 147 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 CDKL1Q00532 357 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 METTL23Q86XA0 190 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 DDIASQ8IXT1 998 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 BBS5Q8N3I7 341 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 DLG3Q92796 817 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 ISL2Q96A47 359 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 CNDP1Q96KN2 507 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 C1QTNF1Q9BXJ1 281 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 SLC39A8Q9C0K1 460 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 AP5M1Q9H0R1 490 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 UPF3AQ9H1J1 476 aaKnown RBP16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 NOL11Q9H8H0 719 aaKnown RBP16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 RAB26Q9ULW5 256 aa16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 FNDC3AQ9Y2H6 1198 aaKnown RBP16.6■□□□□ 0.25
CDC42EP4-201ENST00000335793 TCAF2A6NFQ2 919 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 ZBTB11O95625 1053 aaPredicted RBP16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 TCEA1P23193 301 aaKnown RBP16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 GRIK1P39086 918 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 BRCC3P46736 316 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 ZNF789Q5FWF6 425 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 UBXN11Q5T124 520 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 CUZD1Q86UP6 607 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 FCRL2Q96LA5 508 aaPredicted RBP16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 RAD54BQ9Y620 910 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 ZNF839A8K0R7 811 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 SDHDO14521 159 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 PAGE1O75459 146 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 CRCPO75575 148 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 NR4A1P22736 598 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 YWHAQP27348 245 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 PSEN2P49810 448 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 NEK2P51955 445 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 MAPRE2Q15555 327 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 MTX3Q5HYI7 312 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 MARVELD2Q8N4S9 558 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 OR52K2Q8NGK3 314 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 MAELQ96JY0 434 aaKnown RBP16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 KLHL5Q96PQ7 755 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 FBRSL1Q9HCM7 1045 aaKnown RBP16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 NDFIP2Q9NV92 336 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 MOSPD1Q9UJG1 213 aa16.59■□□□□ 0.25
CDC42EP4-201ENST00000335793 BTBD19C9JJ37 291 aa16.58■□□□□ 0.25
CDC42EP4-201ENST00000335793 K7EPI3 171 aa16.58■□□□□ 0.25
CDC42EP4-201ENST00000335793 BCAS2O75934 225 aaPredicted RBP16.58■□□□□ 0.25
CDC42EP4-201ENST00000335793 IDO1P14902 403 aa16.58■□□□□ 0.25
CDC42EP4-201ENST00000335793 KCNA5P22460 613 aa16.58■□□□□ 0.25
CDC42EP4-201ENST00000335793 TRIM25Q14258 630 aaKnown RBP16.58■□□□□ 0.25
CDC42EP4-201ENST00000335793 ZBTB49Q6ZSB9 765 aa16.58■□□□□ 0.25
CDC42EP4-201ENST00000335793 CATSPERBQ9H7T0 1116 aa16.58■□□□□ 0.25
CDC42EP4-201ENST00000335793 TBC1D30Q9Y2I9 924 aa16.58■□□□□ 0.25
CDC42EP4-201ENST00000335793 TCAF1Q9Y4C2 921 aa16.58■□□□□ 0.25
CDC42EP4-201ENST00000335793 RNF103-CHMP3A0A140T963 221 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 SAC3D1A6NKF1 404 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 TIPRLO75663 272 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 FUCA1P04066 466 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 CKMT2P17540 419 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 GRIA3P42263 894 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 HCAR3P49019 387 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 PCYT1AP49585 367 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 CXCR3P49682 368 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 WNT3AP56704 352 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 INTS6LQ5JSJ4 861 aaKnown RBP16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 Q6ZNX1 250 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms