RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 USP10Q14694 798 aaKnown RBP13.97□□□□□ -0.17
SF1-202ENST00000334944 PPM1LQ5SGD2 360 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 SPATA2LQ8IUW3 424 aaPredicted RBP13.97□□□□□ -0.17
SF1-202ENST00000334944 ARHGAP12Q8IWW6 846 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 Q8N9G6 341 aaPredicted RBP13.97□□□□□ -0.17
SF1-202ENST00000334944 KLHL5Q96PQ7 755 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 NUF2Q9BZD4 464 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 CSNK1G1Q9HCP0 422 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 CYBAP13498 195 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 SERPINB5P36952 375 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 NUDT2P50583 147 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 PRKCZQ05513 592 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 SLC9B1Q4ZJI4 515 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 IL31Q6EBC2 164 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 KRT80Q6KB66 452 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 FAM171BQ6P995 826 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 SCD5Q86SK9 330 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 ACMSDQ8TDX5 336 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 APBB2Q92870 758 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 ACBD6Q9BR61 282 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 PDE4DIPQ5VU43 2346 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 G3V2L1 256 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 GIPC1O14908 333 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 AHSGP02765 367 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 MPSTP25325 297 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 MS4A2Q01362 244 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 ITKQ08881 620 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 GPR107Q5VW38 600 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 PDPK2PQ6A1A2 396 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 PM20D1Q6GTS8 502 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 DCLRE1AQ6PJP8 1040 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 MIB1Q86YT6 1006 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 SCAIQ8N9R8 606 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 BHLHE22Q8NFJ8 381 aaPredicted RBP13.96□□□□□ -0.17
SF1-202ENST00000334944 SOCS4Q8WXH5 440 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 MARK4Q96L34 752 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 CDRT15Q96T59 188 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 COG4Q9H9E3 785 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 NMRAL1Q9HBL8 299 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 RBM22Q9NW64 420 aaKnown RBP eCLIP13.96□□□□□ -0.171e-7■■■■■ 53.2
SF1-202ENST00000334944 ZNHIT2Q9UHR6 403 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 NEU3Q9UQ49 428 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 FIS1Q9Y3D6 152 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 ARHGEF37A1IGU5 675 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 MANSC4A6NHS7 340 aaPredicted RBP13.96□□□□□ -0.17
SF1-202ENST00000334944 NCAM2O15394 837 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 IRAK2O43187 625 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 GJB3O75712 270 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 DDHD2O94830 711 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 HLA-DQB2P05538 268 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 PPARGP37231 505 aaPredicted RBP13.96□□□□□ -0.17
SF1-202ENST00000334944 NUP107P57740 925 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 MGAT3Q09327 533 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 CDH17Q12864 832 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 CARTPTQ16568 116 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 BORAQ6PGQ7 559 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 RPS27LQ71UM5 84 aaKnown RBP13.96□□□□□ -0.17
SF1-202ENST00000334944 CIR1Q86X95 450 aaPredicted RBP13.96□□□□□ -0.17
SF1-202ENST00000334944 RNF135Q8IUD6 432 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 MFSD6LQ8IWD5 586 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 EME1Q96AY2 570 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 PGAP3Q96FM1 320 aaPredicted RBP13.96□□□□□ -0.17
SF1-202ENST00000334944 OR52B2Q96RD2 323 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 TMEM79Q9BSE2 394 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 SPC25Q9HBM1 224 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 PLK2Q9NYY3 685 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 RIMS3Q9UJD0 308 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 Q9Y3F1 56 aa13.96□□□□□ -0.17
SF1-202ENST00000334944 A0A0U1RQF3 1178 aa13.96□□□□□ -0.18
SF1-202ENST00000334944 ARSAP15289 507 aa13.96□□□□□ -0.18
SF1-202ENST00000334944 RPL9P32969 192 aaKnown RBP13.96□□□□□ -0.18
SF1-202ENST00000334944 YWHAHQ04917 246 aaPredicted RBP13.96□□□□□ -0.18
SF1-202ENST00000334944 SF3B4Q15427 424 aaKnown RBP eCLIP13.96□□□□□ -0.182e-7■■■■□ 24.8
SF1-202ENST00000334944 LDB1Q86U70 411 aaPredicted RBP13.96□□□□□ -0.18
SF1-202ENST00000334944 CEP97Q8IW35 865 aa13.96□□□□□ -0.18
SF1-202ENST00000334944 STARD8Q92502 1023 aa13.96□□□□□ -0.18
SF1-202ENST00000334944 ARPC5LQ9BPX5 153 aa13.96□□□□□ -0.18
SF1-202ENST00000334944 HCSTQ9UBK5 93 aa13.96□□□□□ -0.18
SF1-202ENST00000334944 MTF2Q9Y483 593 aaPredicted RBP13.96□□□□□ -0.18
SF1-202ENST00000334944 TRPM7Q96QT4 1865 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 ZBTB14O43829 449 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 MAFKO60675 156 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 OR1G1P47890 313 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 HCAR3P49019 387 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 NAGLUP54802 743 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 TUSC3Q13454 348 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 PRPSAP1Q14558 356 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 NR1D2Q14995 579 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 ADRM1Q16186 407 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 ATAD1Q8NBU5 361 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 HPS1Q92902 700 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 GATA5Q9BWX5 397 aaPredicted RBP13.95□□□□□ -0.18
SF1-202ENST00000334944 FSD1LQ9BXM9 530 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 IL22Q9GZX6 179 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 CHST12Q9NRB3 414 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 ATAD3AQ9NVI7 634 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 POU2F3Q9UKI9 436 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 TRHDEQ9UKU6 1024 aa13.95□□□□□ -0.18
SF1-202ENST00000334944 RUVBL2Q9Y230 463 aaKnown RBP13.95□□□□□ -0.18
SF1-202ENST00000334944 SCN10AQ9Y5Y9 1956 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms