RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 YARSP54577 528 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PPP2R2AP63151 447 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PPIDQ08752 370 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 NSUN2Q08J23 767 aaKnown RBP eCLIP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ELP6Q0PNE2 266 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 APOBRQ0VD83 1088 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 EIF2B5Q13144 721 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ZSWIM7Q19AV6 140 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TMEM119Q4V9L6 283 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 NUGGCQ68CJ6 796 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 RAB11FIP2Q7L804 512 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TRABD2AQ86V40 505 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 FAM114A1Q8IWE2 563 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 BRSK2Q8IWQ3 736 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PAPD5Q8NDF8 572 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 BEND2Q8NDZ0 799 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 BHLHE22Q8NFJ8 381 aaPredicted RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ABHD11Q8NFV4 315 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 IL17DQ8TAD2 202 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PPP1R14CQ8TAE6 165 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CRELD1Q96HD1 420 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 RADILQ96JH8 1075 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 FCRL1Q96LA6 429 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PANX2Q96RD6 677 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 NCAPGQ9BPX3 1015 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ACSS3Q9H6R3 686 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CERS4Q9HA82 394 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 UGT1A8Q9HAW9 530 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 NEUROD4Q9HD90 331 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 SH2D2AQ9NP31 389 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MRPL40Q9NQ50 206 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 KLHL42Q9P2K6 505 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 REV1Q9UBZ9 1251 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 DDX19BQ9UMR2 479 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 INPP5FQ9Y2H2 1132 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 WASF2Q9Y6W5 498 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 SDK2Q58EX2 2172 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 HELZ2Q9BYK8 2649 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CR1P17927 2039 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 FBN2P35556 2912 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TRAV17A0A0B4J275 112 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 SLC35F4A4IF30 521 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 OGTO15294 1046 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PRMT3O60678 531 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 SOCS5O75159 536 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 USP12O75317 370 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 BMP15O95972 392 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 OR52Z1P0C646 297 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 FAM200BP0CF97 657 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 HKR1P10072 659 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TRIM21P19474 475 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 NDUFS1P28331 727 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 LCN1P31025 176 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 FOLR3P41439 243 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MAPKAPK2P49137 400 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TAF6P49848 677 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 EPHB1P54762 984 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MTTPP55157 894 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CASP6P55212 293 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CDH8P55286 799 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TSPY1Q01534 308 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 DMP1Q13316 513 aaPredicted RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PLCL1Q15111 1095 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 FLYWCH1Q4VC44 716 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 SAMD5Q5TGI4 173 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TMEM205Q6UW68 189 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ANO5Q75V66 913 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 DPPA4Q7L190 304 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 STRA8Q7Z7C7 330 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 RASGRP3Q8IV61 690 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 OR6B3Q8NGW1 331 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 SMARCC2Q8TAQ2 1214 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 FNIP1Q8TF40 1166 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 HEXDCQ8WVB3 486 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 BIRC7Q96CA5 298 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF837Q96EG3 531 aaPredicted RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MYEOVQ96EZ4 313 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 GFM1Q96RP9 751 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TCHPQ9BT92 498 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ZDHHC11Q9H8X9 412 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TLR8Q9NR97 1041 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ELOVL2Q9NXB9 296 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MIOSQ9NXC5 875 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 IL17CQ9P0M4 197 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ZSWIM5Q9P217 1185 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PLAAQ9Y263 795 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 BTBD3Q9Y2F9 522 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MRPS18BQ9Y676 258 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 COL6A5A8TX70 2615 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 STAB1Q9NY15 2570 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 KIAA0100Q14667 2235 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PRAMEF33A0A0G2JMD5 474 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 IGHV5-10-1A0A0J9YXX1 117 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 FAM177BA6PVY3 158 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CCL16O15467 120 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 KLK10O43240 276 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CYTH3O43739 400 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PRAMEF10O60809 474 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PRAMEF2O60811 474 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms