RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 DYNLT1P63172 113 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 BASP1P80723 227 aaKnown RBP11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 KRT81Q14533 505 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 TPSAB1Q15661 275 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 SMTNL2Q2TAL5 461 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 DCAF6Q58WW2 860 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 CMPK2Q5EBM0 449 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 FNBP1LQ5T0N5 605 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 MPP7Q5T2T1 576 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 ANKRD22Q5VYY1 191 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 LYSMD4Q5XG99 296 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 OLFML1Q6UWY5 402 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 BZW1Q7L1Q6 419 aaKnown RBP11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 OTOAQ7RTW8 1153 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 PRUNE1Q86TP1 453 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 ADIPOR2Q86V24 386 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 ANKMY2Q8IV38 441 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 MFN1Q8IWA4 741 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 FAM71DQ8N9W8 422 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 CYB5D2Q8WUJ1 264 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 HSPH1Q92598 858 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 PIGKQ92643 395 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 AZIN2Q96A70 460 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 FAF2Q96CS3 445 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 SIKE1Q9BRV8 207 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 MKRN2Q9H000 416 aaKnown RBP11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 MANSC1Q9H8J5 431 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 RCOR3Q9P2K3 495 aaPredicted RBP11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 C15orf41Q9Y2V0 281 aa11.21□□□□□ -0.61
APOBEC3B-201ENST00000333467 NUMA1Q14980 2115 aa11.21□□□□□ -0.62
APOBEC3B-201ENST00000333467 SYNJ2BP-COX16A0A087WUM0 186 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 TCRBV9S1A1TA0A576 114 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 H7C0C1 242 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 CCDC22O60826 627 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 ZNF217O75362 1048 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 DAB1O75553 588 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 EPHX1P07099 455 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 SNRPAP09012 282 aaKnown RBP11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 HLA-EP13747 358 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 SDC4P31431 198 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 PTPN9P43378 593 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 ATP5OP48047 213 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 NEK3P51956 506 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 SARNPP82979 210 aaKnown RBP11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 CDK16Q00536 496 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 NAB1Q13506 487 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 KRT72Q14CN4 511 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 E2F5Q15329 346 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 FNDC3BQ53EP0 1204 aaKnown RBP11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 MS4A13Q5J8X5 152 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 KCNT1Q5JUK3 1230 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 STPG1Q5TH74 334 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 RAP1GAP2Q684P5 730 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 TLDC1Q6P9B6 456 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 SLC36A4Q6YBV0 504 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 NLRP9Q7RTR0 991 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 KIAA0907Q7Z7F0 614 aaPredicted RBP11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 LRRC6Q86X45 466 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 CCNJLQ8IV13 435 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 PSTKQ8IV42 348 aaKnown RBP11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 DEFB106AQ8N104 65 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 DEFB119Q8N690 84 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 ZNF366Q8N895 744 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 TCP10LQ8TDR4 215 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 AGAP11Q8TF27 550 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 RXFP2Q8WXD0 754 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 SLC2A13Q96QE2 648 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 DDX50Q9BQ39 737 aaKnown RBP11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 FERMT1Q9BQL6 677 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 IQCGQ9H095 443 aaKnown RBP11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 XAB2Q9HCS7 855 aaKnown RBP11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 COX16Q9P0S2 106 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 ZFP69BQ9UJL9 534 aa11.2□□□□□ -0.62
APOBEC3B-201ENST00000333467 A0A1W2PPM1 405 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 HACD1B0YJ81 288 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 GOLGA8MH3BSY2 632 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 LIN7AO14910 233 aaPredicted RBP11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 SYNCRIPO60506 623 aaKnown RBP11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 KRT38O76015 456 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 ANP32DO95626 131 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 ITPKAP23677 461 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 CCNFP41002 786 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 ELK3P41970 407 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 COPAP53621 1224 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 SLC6A3Q01959 620 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 LMAN2Q12907 356 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 EIF4EBP2Q13542 120 aaPredicted RBP11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 CDH18Q13634 790 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 CRYMQ14894 314 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 TBCCQ15814 346 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 PTPRNQ16849 979 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 MSS51Q4VC12 460 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 EFHC1Q5JVL4 640 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 PEAR1Q5VY43 1037 aaPredicted RBP11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 ATG16L1Q676U5 607 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 MBLAC2Q68D91 279 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 IL31Q6EBC2 164 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 OR6B2Q6IFH4 312 aa11.19□□□□□ -0.62
APOBEC3B-201ENST00000333467 SLC26A9Q7LBE3 791 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms