RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 CENPAP49450 140 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 MAPK10P53779 464 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 TJAP1Q5JTD0 557 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 FSTL4Q6MZW2 842 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 DDX1Q92499 740 aaKnown RBP13.05□□□□□ -0.32
VSTM4-202ENST00000332853 TMCC3Q9ULS5 477 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 AHDC1Q5TGY3 1603 aaPredicted RBP13.05□□□□□ -0.32
VSTM4-202ENST00000332853 RPP40O75818 363 aaKnown RBP13.05□□□□□ -0.32
VSTM4-202ENST00000332853 RGS20O76081 388 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 LRATO95237 230 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 SNAI1O95863 264 aaPredicted RBP13.05□□□□□ -0.32
VSTM4-202ENST00000332853 NTRK1P04629 796 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 S100A5P33763 92 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 PIK3CGP48736 1102 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 GPR15P49685 360 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 DLG2Q15700 870 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 MTSS1LQ765P7 747 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 UTP15Q8TED0 518 aaKnown RBP13.05□□□□□ -0.32
VSTM4-202ENST00000332853 BDH2Q9BUT1 245 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 ROGDIQ9GZN7 287 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 PIGVQ9NUD9 493 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 SIX4Q9UIU6 781 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 H3BMM5 538 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 MATN3O15232 486 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 AOC2O75106 756 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 CLDN11O75508 207 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 MLYCDO95822 493 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 HNRNPCP07910 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
VSTM4-202ENST00000332853 CPSF6Q16630 551 aaKnown RBP eCLIP13.05□□□□□ -0.32
VSTM4-202ENST00000332853 SERPINA13PQ6UXR4 307 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 BBS7Q8IWZ6 715 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 GSTCDQ8NEC7 633 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 GPR156Q8NFN8 814 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 UPF1Q92900 1129 aaKnown RBP eCLIP13.05□□□□□ -0.327e-6■■■■□ 22.8
VSTM4-202ENST00000332853 BCO2Q9BYV7 579 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 CYLDQ9NQC7 956 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 LGALS13Q9UHV8 139 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 SLC12A4Q9UP95 1085 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 FCF1Q9Y324 198 aaKnown RBP13.05□□□□□ -0.32
VSTM4-202ENST00000332853 AZIN1O14977 448 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 CSTF3Q12996 717 aaKnown RBP13.05□□□□□ -0.32
VSTM4-202ENST00000332853 AP5B1Q2VPB7 878 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 TRIM60Q495X7 471 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 DCBLD1Q8N8Z6 715 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 LMO3Q8TAP4 145 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 CSGALNACT1Q8TDX6 532 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 CYP2S1Q96SQ9 504 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 PCDH12Q9NPG4 1184 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 C6orf203Q9P0P8 240 aaPredicted RBP13.05□□□□□ -0.32
VSTM4-202ENST00000332853 CIDEBQ9UHD4 219 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 LRCH1Q9Y2L9 728 aa13.05□□□□□ -0.32
VSTM4-202ENST00000332853 ATG7O95352 703 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 ANPEPP15144 967 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 SLC25A11Q02978 314 aaKnown RBP13.04□□□□□ -0.32
VSTM4-202ENST00000332853 ACSM2AQ08AH3 577 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 DPYSL2Q16555 572 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 ACSM2BQ68CK6 577 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 NCBP2-AS2Q69YL0 99 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 GLMNQ92990 594 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 MYOCQ99972 504 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 CD84Q9UIB8 345 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 SORCS3Q9UPU3 1222 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 TCAF1Q9Y4C2 921 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 TAF1P21675 1872 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 ITGB4P16144 1822 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 OLIG2Q13516 323 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 ZFP1Q6P2D0 407 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 DRICH1Q6PGQ1 229 aaPredicted RBP13.04□□□□□ -0.32
VSTM4-202ENST00000332853 CLNKQ7Z7G1 428 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 DSG4Q86SJ6 1040 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 OSTM1Q86WC4 334 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 EID3Q8N140 333 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 C10orf53Q8N6V4 93 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 CNTN3Q9P232 1028 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 EGFL7Q9UHF1 273 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 MTF2Q9Y483 593 aaPredicted RBP13.04□□□□□ -0.32
VSTM4-202ENST00000332853 AP4S1Q9Y587 144 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 KIF1CO43896 1103 aaKnown RBP13.04□□□□□ -0.32
VSTM4-202ENST00000332853 GLUD1P00367 558 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 OCM2P0CE71 109 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 OCMP0CE72 109 aaPredicted RBP13.04□□□□□ -0.32
VSTM4-202ENST00000332853 HSMCR30P0CW71 290 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 GRB14Q14449 540 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 CLEC6AQ6EIG7 209 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 NPAS4Q8IUM7 802 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 NAT8LQ8N9F0 302 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 RIBC2Q9H4K1 309 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 TMEM216Q9P0N5 145 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 TRAF6Q9Y4K3 522 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 CHRNA4P43681 627 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 CXCR3P49682 368 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 ACBD5Q5T8D3 534 aaPredicted RBP13.04□□□□□ -0.32
VSTM4-202ENST00000332853 DEPDC1Q5TB30 811 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 ARL14EPQ8N8R7 260 aaPredicted RBP13.04□□□□□ -0.32
VSTM4-202ENST00000332853 SLC4A5Q9BY07 1137 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 VPS45Q9NRW7 570 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 CACNA2D2Q9NY47 1150 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 KIAA1522Q9P206 1035 aaPredicted RBP13.04□□□□□ -0.32
VSTM4-202ENST00000332853 TK2O00142 265 aa13.04□□□□□ -0.32
VSTM4-202ENST00000332853 CA12O43570 354 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms