RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 C1QTNF8P60827 252 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 C6orf163Q5TEZ5 329 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 PTERQ96BW5 349 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 PRICKLE1Q96MT3 831 aaPredicted RBP18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 KCNA7Q96RP8 456 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 MUC3BQ9H195 1237 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 ATP13A1Q9HD20 1204 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 ZNF212Q9UDV6 495 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 TARM1B6A8C7 271 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 UBTFL6P0CB48 400 aaPredicted RBP18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 GJA1P17302 382 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 ATP5C1P36542 298 aaKnown RBP18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 MRPL58Q14197 206 aaKnown RBP18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 ZNF549Q6P9A3 640 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 SCIMPQ6UWF3 145 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 OR4K2Q8NGD2 314 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 TM6SF2Q9BZW4 377 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 POLR1EQ9GZS1 481 aaKnown RBP18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 CDYLQ9Y232 598 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 DOCK6Q96HP0 2047 aa18.24■□□□□ 0.51
LYSMD4-201ENST00000332728 UBXN8O00124 270 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 S1PR4O95977 384 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 ECT2LQ008S8 904 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 DNAL1Q4LDG9 190 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 FSCBQ5H9T9 825 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 RNF111Q6ZNA4 994 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 CCDC97Q96F63 343 aaPredicted RBP18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 CDRT15Q96T59 188 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 VPS45Q9NRW7 570 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 UTP6Q9NYH9 597 aaKnown RBP18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 GMPR2Q9P2T1 348 aaKnown RBP18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 IQCF5A8MTL0 148 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 OR1I1O60431 355 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 CTPS1P17812 591 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 HOXD10P28358 340 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 VHLP40337 213 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 NSUN2Q08J23 767 aaKnown RBP eCLIP18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 MSLNQ13421 630 aaPredicted RBP18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 ATXN7L2Q5T6C5 722 aaPredicted RBP18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 BEND5Q7L4P6 421 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 CARNMT1Q8N4J0 409 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 CMTM5Q96DZ9 223 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 TRIM8Q9BZR9 551 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 ABCG8Q9H221 673 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 IL1RL2Q9HB29 575 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 CCDC167Q9P0B6 97 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 USP34Q70CQ2 3546 aa18.23■□□□□ 0.51
LYSMD4-201ENST00000332728 A0A1B0GTL3 188 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 CCDC189A1A4V9 331 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 K7ERQ8 282 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 HADHAP40939 763 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 GNA12Q03113 381 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 FAM83EQ2M2I3 478 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 IZUMO2Q6UXV1 221 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 CNTN4Q8IWV2 1026 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 FAM126BQ8IXS8 530 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 KDM1BQ8NB78 822 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 SEPT8Q92599 483 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 REV3LO60673 3130 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 OR6C75A6NL08 312 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 UBFD1O14562 309 aaKnown RBP18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 KIF3CO14782 793 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 CD3EAPO15446 510 aaKnown RBP18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 RTN3O95197 1032 aaPredicted RBP18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 ITGB6P18564 788 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 HOXD9P28356 352 aaPredicted RBP18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 TWF1Q12792 350 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 CCNIQ14094 377 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 PFKFB4Q16877 469 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 PITRM1Q5JRX3 1037 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 RNF219Q5W0B1 726 aaPredicted RBP18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 ANO7Q6IWH7 933 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 SDCCAG8Q86SQ7 713 aaPredicted RBP18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 NPAS4Q8IUM7 802 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 ARHGAP18Q8N392 663 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 ZNF333Q96JL9 665 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 SLC39A3Q9BRY0 314 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 CINPQ9BW66 212 aaPredicted RBP18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 HIPK3Q9H422 1215 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 ANKRD6Q9Y2G4 727 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 COPG1Q9Y678 874 aaKnown RBP18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 H3BMM5 538 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 ACSL4O60488 711 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 MAGEC1O60732 1142 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 MZF1P28698 734 aaPredicted RBP18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 CRABP2P29373 138 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 RAP1GDS1P52306 607 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 ACTR3P61158 418 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 NKX3-2P78367 333 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 ACAD11Q709F0 780 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 SPPL2BQ8TCT7 592 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 NSMCE4AQ9NXX6 385 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 DNMT3LQ9UJW3 386 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 IKZF3Q9UKT9 509 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 POMPQ9Y244 141 aa18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 FCF1Q9Y324 198 aaKnown RBP18.22■□□□□ 0.51
LYSMD4-201ENST00000332728 TMEM114B3SHH9 223 aa18.21■□□□□ 0.51
LYSMD4-201ENST00000332728 TMEM189-UBE2V1I3L0A0 370 aa18.21■□□□□ 0.51
LYSMD4-201ENST00000332728 PRAMEF11O60813 436 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms