RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 SKAP2O75563 359 aaPredicted RBP14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 GJB5O95377 273 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 GOT2P00505 430 aaKnown RBP14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 DNAJB13P59910 316 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 RPS24P62847 133 aaKnown RBP14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 BLMHQ13867 455 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 FBXW8Q8N3Y1 598 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 SLC26A7Q8TE54 656 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 PXYLP1Q8TE99 480 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 NACA2Q9H009 215 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 ZNF385DQ9H6B1 395 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 ALG9Q9H6U8 611 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 S100A14Q9HCY8 104 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 BATF3Q9NR55 127 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 RGSL1A5PLK6 1076 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 IPO13O94829 963 aaKnown RBP14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 THRAP10827 490 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 HOXD9P28356 352 aaPredicted RBP14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 KCNC1P48547 511 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 SULT2A1Q06520 285 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 SEMA3AQ14563 771 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 SLC14A2Q15849 920 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 IL31Q6EBC2 164 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 KLC3Q6P597 504 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 ANKS3Q6ZW76 656 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 NPAS4Q8IUM7 802 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 FBXO22Q8NEZ5 403 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 FAM136AQ96C01 138 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 EXOC2Q96KP1 924 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 ZNF512Q96ME7 567 aaPredicted RBP14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 SPON2Q9BUD6 331 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 ZFP37Q9Y6Q3 630 aaPredicted RBP14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 SCN5AQ14524 2016 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 H7C4K7 107 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 SDHDO14521 159 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 ACSL4O60488 711 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 PRSS56P0CW18 603 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 ARMC3Q5W041 872 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 FAM126BQ8IXS8 530 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 PLCD3Q8N3E9 789 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 CPSF7Q8N684 471 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 SEPT8Q92599 483 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 RCN3Q96D15 328 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 SCLYQ96I15 445 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 FEM1CQ96JP0 617 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 CAPNS2Q96L46 248 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 NSMCE3Q96MG7 304 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 COPG1Q9Y678 874 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 CHD5Q8TDI0 1954 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 CCDC162PA2VCL2 907 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 KIF3CO14782 793 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 FKBP6O75344 327 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 FGF1P05230 155 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 HLA-DPA1P20036 260 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 ATP5C1P36542 298 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 RGRP47804 291 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 MTTPP55157 894 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 GNA12Q03113 381 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 ELAVL2Q12926 359 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 BFSP2Q13515 415 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 CYLC2Q14093 348 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 ACAP2Q15057 778 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 ZNF549Q6P9A3 640 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 RNF111Q6ZNA4 994 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 GALNT7Q86SF2 657 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 DENND1CQ8IV53 801 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 LMNTD2Q8IXW0 634 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 ZNF184Q99676 751 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 CCDC28BQ9BUN5 200 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 DNMT3LQ9UJW3 386 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 PHF24Q9UPV7 400 aa14.91□□□□□ -0.02
CLCNKA-201ENST00000331433 CD3EAPO15446 510 aaKnown RBP14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 GLP2RO95838 553 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 MYCP01106 439 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 SERPINF2P08697 491 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 RBP1P09455 135 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 TSPAN8P19075 237 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 SP100P23497 879 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 KPNA1P52294 538 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 SMARCB1Q12824 385 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 CRIPAKQ8N1N5 446 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 RP9Q8TA86 221 aaKnown RBP14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 MICAL1Q8TDZ2 1067 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 UCMAQ8WVF2 138 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 ZBTB26Q9HCK0 441 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 WISP3O95389 354 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 OR1D2P34982 312 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 SGSHP51688 502 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 C1QTNF8P60827 252 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 ACVR1Q04771 509 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 IZUMO2Q6UXV1 221 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 ISCA2Q86U28 154 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 CUZD1Q86UP6 607 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 DSELQ8IZU8 1212 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 RYBPQ8N488 228 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 KYQ8NBH2 561 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 EXT2Q93063 718 aa14.9□□□□□ -0.02
CLCNKA-201ENST00000331433 PTERQ96BW5 349 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms