RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 PPCSQ9HAB8 311 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 SENP1Q9P0U3 644 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 GCAP28676 217 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 NTSR1P30989 418 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 PTPN5P54829 565 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 NCALDP61601 193 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 BASP1P80723 227 aaKnown RBP9.56□□□□□ -0.88
C11orf54-201ENST00000331239 TFF2Q03403 129 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 CDK18Q07002 472 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 BCL2L1Q07817 233 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 NIPAL4Q0D2K0 466 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 CCINQ13939 588 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 ZNF234Q14588 700 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 FNDC3BQ53EP0 1204 aaKnown RBP9.56□□□□□ -0.88
C11orf54-201ENST00000331239 FSTL4Q6MZW2 842 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 RNF135Q8IUD6 432 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 ZBED8Q8IZ13 594 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 ZNF687Q8N1G0 1237 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 RAB7BQ96AH8 199 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 GRAMD1AQ96CP6 724 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 PPP1R16AQ96I34 528 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 TRIB3Q96RU7 358 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 IL22Q9GZX6 179 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 ARHGEF3Q9NR81 526 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 KCTD5Q9NXV2 234 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 BFARQ9NZS9 450 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 PHTF1Q9UMS5 762 aa9.56□□□□□ -0.88
C11orf54-201ENST00000331239 SDR42E2A6NKP2 422 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 POC1B-GALNT4F8VUJ3 575 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 PRPF4O43172 522 aaKnown RBP eCLIP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 FZD6O60353 706 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 RNASEH1O60930 286 aaKnown RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 PAPSS2O95340 614 aaPredicted RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 MT-CO1P00395 513 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 APRTP07741 180 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 TAC1P20366 129 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 RPS9P46781 194 aaKnown RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 GRIA4P48058 902 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 WNT3AP56704 352 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 KDSRQ06136 332 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 ITKQ08881 620 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 HIF1AQ16665 826 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 GALNTL6Q49A17 601 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 CGB2Q6NT52 195 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 OR2A12Q8NGT7 310 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 MAGEC3Q8TD91 643 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 DTX3LQ8TDB6 740 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 USP33Q8TEY7 942 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 IFT43Q96FT9 208 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 MRGPRX2Q96LB1 330 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 LYSMD1Q96S90 227 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 GORASP1Q9BQQ3 440 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 MLPHQ9BV36 600 aaPredicted RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 TDRD1Q9BXT4 1180 aaKnown RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 C10orf88Q9H8K7 445 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 NOD2Q9HC29 1040 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 GGT7Q9UJ14 662 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 SMG5Q9UPR3 1016 aaKnown RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 C1QTNF3-AMACRE9PGA6 284 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 TRAFD1O14545 582 aaPredicted RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 SMAD6O43541 496 aaKnown RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 ASMTLO95671 621 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 ADH1BP00325 375 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 ASGR2P07307 311 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 KRT15P19012 456 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 FOXN2P32314 431 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 CD86P42081 329 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 CTSOP43234 321 aaPredicted RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 SCNN1BP51168 640 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 SLC18A1P54219 525 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 WDR4P57081 412 aaKnown RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 PDIA2Q13087 525 aaKnown RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 STARD3Q14849 445 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 RASA2Q15283 850 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 TJAP1Q5JTD0 557 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 HP1BP3Q5SSJ5 553 aaPredicted RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 ARMC12Q5T9G4 340 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 ZDHHC20Q5W0Z9 365 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 LINGO4Q6UY18 593 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 CAPN12Q6ZSI9 719 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 GJD3Q8N144 294 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 ZNF513Q8N8E2 541 aaPredicted RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 PTPRN2Q92932 1015 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 CLDN23Q96B33 292 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 OXNAD1Q96HP4 312 aaPredicted RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 ZNF419Q96HQ0 510 aaPredicted RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 SMC6Q96SB8 1091 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 FSD1LQ9BXM9 530 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 SUV39H2Q9H5I1 410 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 HEBP1Q9NRV9 189 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 RAD18Q9NS91 495 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 KLHL14Q9P2G3 628 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 PSMC3IPQ9P2W1 217 aaPredicted RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 IL36AQ9UHA7 158 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 SLC24A2Q9UI40 661 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 SLCO3A1Q9UIG8 710 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 FCF1Q9Y324 198 aaKnown RBP9.55□□□□□ -0.88
C11orf54-201ENST00000331239 STON1Q9Y6Q2 735 aa9.55□□□□□ -0.88
C11orf54-201ENST00000331239 ANKRD36A6QL64 1941 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms