RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 CRLF3Q8IUI8 442 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 DCAF4L2Q8NA75 395 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 GPR150Q8NGU9 434 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 FIBINQ8TAL6 211 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 MICAL1Q8TDZ2 1067 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 SH3RF2Q8TEC5 729 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 NXNL1Q96CM4 212 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 ERP27Q96DN0 273 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 CDKN2AIPNLQ96HQ2 116 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 LMLNQ96KR4 655 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 NDNQ99608 321 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 MCOLN1Q9GZU1 580 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 TASP1Q9H6P5 420 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 ECT2Q9H8V3 914 aa17.03■□□□□ 0.32
DDX41-201ENST00000330503 NLE1Q9NVX2 485 aaPredicted RBP17.03■□□□□ 0.32
DDX41-201ENST00000330503 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.03■□□□□ 0.32
DDX41-201ENST00000330503 TARM1B6A8C7 271 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 SMAD6O43541 496 aaKnown RBP17.02■□□□□ 0.32
DDX41-201ENST00000330503 MYL2P10916 166 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 EPCAMP16422 314 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 PTPN2P17706 415 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 SLC8A1P32418 973 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 CLCN5P51795 746 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 ITGA9Q13797 1035 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 SEMA3AQ14563 771 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 PTPRRQ15256 657 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 TEAD2Q15562 447 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 ATXN7L2Q5T6C5 722 aaPredicted RBP17.02■□□□□ 0.32
DDX41-201ENST00000330503 NAPRTQ6XQN6 538 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 LCA5Q86VQ0 697 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 ARID3BQ8IVW6 561 aaPredicted RBP17.02■□□□□ 0.32
DDX41-201ENST00000330503 LMNTD2Q8IXW0 634 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 LPCAT1Q8NF37 534 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 SORT1Q99523 831 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 CPSF2Q9P2I0 782 aaKnown RBP17.02■□□□□ 0.32
DDX41-201ENST00000330503 HEY2Q9UBP5 337 aa17.02■□□□□ 0.32
DDX41-201ENST00000330503 ANKRD36A6QL64 1941 aa17.02■□□□□ 0.31
DDX41-201ENST00000330503 ANKRD66B4E2M5 251 aa17.02■□□□□ 0.31
DDX41-201ENST00000330503 C5orf67F2Z3F1 127 aa17.02■□□□□ 0.31
DDX41-201ENST00000330503 CD3EAPO15446 510 aaKnown RBP17.02■□□□□ 0.31
DDX41-201ENST00000330503 CLASP2O75122 1294 aaKnown RBP17.02■□□□□ 0.31
DDX41-201ENST00000330503 GRK2P25098 689 aa17.02■□□□□ 0.31
DDX41-201ENST00000330503 CD70P32970 193 aa17.02■□□□□ 0.31
DDX41-201ENST00000330503 RHOAP61586 193 aa17.02■□□□□ 0.31
DDX41-201ENST00000330503 UBE3AQ05086 875 aa17.02■□□□□ 0.31
DDX41-201ENST00000330503 TAF1AQ15573 450 aaPredicted RBP17.02■□□□□ 0.31
DDX41-201ENST00000330503 SLC5A9Q2M3M2 681 aa17.02■□□□□ 0.31
DDX41-201ENST00000330503 RTL10Q7L3V2 364 aa17.02■□□□□ 0.31
DDX41-201ENST00000330503 CMTM8Q8IZV2 173 aa17.02■□□□□ 0.31
DDX41-201ENST00000330503 SPATA6LQ8N4H0 392 aa17.02■□□□□ 0.31
DDX41-201ENST00000330503 GABPB2Q8TAK5 448 aaPredicted RBP17.02■□□□□ 0.31
DDX41-201ENST00000330503 INTS6Q9UL03 887 aaKnown RBP17.02■□□□□ 0.31
DDX41-201ENST00000330503 NOTCH4Q99466 2003 aa17.02■□□□□ 0.31
DDX41-201ENST00000330503 FZD6O60353 706 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 KLHL2O95198 593 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 CRTAMO95727 393 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 GLP2RO95838 553 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 RHOP08100 348 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 KITP10721 976 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 GLRBP48167 497 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 HECTD2Q5U5R9 776 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 FSTL5Q8N475 847 aaPredicted RBP17.01■□□□□ 0.31
DDX41-201ENST00000330503 OR4L1Q8NH43 312 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 PPM1EQ8WY54 764 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 USP13Q92995 863 aaPredicted RBP17.01■□□□□ 0.31
DDX41-201ENST00000330503 OXSMQ9NWU1 459 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 KCNK4Q9NYG8 393 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 KIAA1522Q9P206 1035 aaPredicted RBP17.01■□□□□ 0.31
DDX41-201ENST00000330503 MARCOQ9UEW3 520 aaPredicted RBP17.01■□□□□ 0.31
DDX41-201ENST00000330503 MYO7AQ13402 2215 aa17.01■□□□□ 0.31
DDX41-201ENST00000330503 TK2O00142 265 aa17■□□□□ 0.31
DDX41-201ENST00000330503 APOA4P06727 396 aa17■□□□□ 0.31
DDX41-201ENST00000330503 PRSS56P0CW18 603 aa17■□□□□ 0.31
DDX41-201ENST00000330503 T-ENOLP0DO92 83 aa17■□□□□ 0.31
DDX41-201ENST00000330503 ABCE1P61221 599 aaKnown RBP17■□□□□ 0.31
DDX41-201ENST00000330503 ZYG11AQ6WRX3 759 aa17■□□□□ 0.31
DDX41-201ENST00000330503 OR4K2Q8NGD2 314 aa17■□□□□ 0.31
DDX41-201ENST00000330503 C2orf49Q9BVC5 232 aaPredicted RBP17■□□□□ 0.31
DDX41-201ENST00000330503 IGSF5Q9NSI5 407 aa17■□□□□ 0.31
DDX41-201ENST00000330503 VWA7Q9Y334 891 aa17■□□□□ 0.31
DDX41-201ENST00000330503 RWDD3Q9Y3V2 267 aa17■□□□□ 0.31
DDX41-201ENST00000330503 HELZP42694 1942 aaKnown RBP17■□□□□ 0.31
DDX41-201ENST00000330503 A0A087X1B8 175 aa17■□□□□ 0.31
DDX41-201ENST00000330503 GRXCR1A8MXD5 290 aa17■□□□□ 0.31
DDX41-201ENST00000330503 TRIM13O60858 407 aa17■□□□□ 0.31
DDX41-201ENST00000330503 WISP3O95389 354 aaPredicted RBP17■□□□□ 0.31
DDX41-201ENST00000330503 ABL2P42684 1182 aa17■□□□□ 0.31
DDX41-201ENST00000330503 PLK1P53350 603 aa17■□□□□ 0.31
DDX41-201ENST00000330503 CDKN2DP55273 166 aa17■□□□□ 0.31
DDX41-201ENST00000330503 NTHL1P78549 312 aa17■□□□□ 0.31
DDX41-201ENST00000330503 LRRC8EQ6NSJ5 796 aa17■□□□□ 0.31
DDX41-201ENST00000330503 ZNF549Q6P9A3 640 aa17■□□□□ 0.31
DDX41-201ENST00000330503 GLT6D1Q7Z4J2 308 aa17■□□□□ 0.31
DDX41-201ENST00000330503 RDH11Q8TC12 318 aa17■□□□□ 0.31
DDX41-201ENST00000330503 HEXDCQ8WVB3 486 aa17■□□□□ 0.31
DDX41-201ENST00000330503 SKA1Q96BD8 255 aa17■□□□□ 0.31
DDX41-201ENST00000330503 ADGRE3Q9BY15 652 aa17■□□□□ 0.31
DDX41-201ENST00000330503 PNPOQ9NVS9 261 aa17■□□□□ 0.31
DDX41-201ENST00000330503 TRIM33Q9UPN9 1127 aa17■□□□□ 0.31
DDX41-201ENST00000330503 DNAJC16Q9Y2G8 782 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms