RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 PNCKQ6P2M8 343 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 TMEM179Q6ZVK1 233 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 MPP5Q8N3R9 675 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 MCPH1Q8NEM0 835 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 OR6F1Q8NGZ6 308 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 URGCPQ8TCY9 931 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 POP5Q969H6 163 aaKnown RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 DCPSQ96C86 337 aaKnown RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 CCDC126Q96EE4 140 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 ASB2Q96Q27 587 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 TWNKQ96RR1 684 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 MCMBPQ9BTE3 642 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 DSN1Q9H410 356 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 FAM124BQ9H5Z6 455 aaPredicted RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 NOL6Q9H6R4 1146 aaKnown RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 EML4Q9HC35 981 aaKnown RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 PCDH12Q9NPG4 1184 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 WARS2Q9UGM6 360 aaKnown RBP8.43□□□□□ -1.06
SKA2-201ENST00000330137 STAP1Q9ULZ2 295 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 PDE10AQ9Y233 779 aa8.43□□□□□ -1.06
SKA2-201ENST00000330137 WDR27A2RRH5 827 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 CENPXA8MT69 81 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 UBDO15205 165 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 DHX15O43143 795 aaKnown RBP8.42□□□□□ -1.06
SKA2-201ENST00000330137 PLA2G6O60733 806 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 PCNAP12004 261 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 PCMT1P22061 227 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 ADORA2AP29274 412 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 CHRNA5P30532 468 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 LRPAP1P30533 357 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 NDST1P52848 882 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 ATXN3P54252 364 aaPredicted RBP8.42□□□□□ -1.06
SKA2-201ENST00000330137 NPTX1Q15818 432 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 FXNQ16595 210 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 PPM1JQ5JR12 505 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 PAGE2BQ5JRK9 111 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 TREML2Q5T2D2 321 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 XKRXQ6PP77 449 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 NPNTQ6UXI9 565 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 CYP2R1Q6VVX0 501 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 GK5Q6ZS86 529 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 XYLT1Q86Y38 959 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 TMEM151AQ8N4L1 468 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 GALNT6Q8NCL4 622 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 TOR1AIP2Q8NFQ8 470 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 ARNTL2Q8WYA1 636 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 SLC10A4Q96EP9 437 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 QKIQ96PU8 341 aaKnown RBP eCLIP8.42□□□□□ -1.062e-7■■■■□ 25.6
SKA2-201ENST00000330137 ASPSCR1Q9BZE9 553 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 RNF39Q9H2S5 420 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 FBXO5Q9UKT4 447 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 TARM1B6A8C7 271 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 UBXN8O00124 270 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 DPYSL4O14531 572 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 RIMBP2O15034 1052 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 PRPSAP2O60256 369 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 TULP3O75386 442 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 SEC24AO95486 1093 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 NADKO95544 446 aaPredicted RBP8.42□□□□□ -1.06
SKA2-201ENST00000330137 METTL18O95568 372 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 APOA1P02647 267 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 C2P06681 752 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 CHRNGP07510 517 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 DPEP1P16444 411 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 TFE3P19532 575 aaPredicted RBP8.42□□□□□ -1.06
SKA2-201ENST00000330137 DNAJB2P25686 324 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 SSTR3P32745 418 aaPredicted RBP8.42□□□□□ -1.06
SKA2-201ENST00000330137 NR4A2P43354 598 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 TAGLNQ01995 201 aaKnown RBP8.42□□□□□ -1.06
SKA2-201ENST00000330137 PRKCDQ05655 676 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 TARDBPQ13148 414 aaKnown RBP eCLIP8.42□□□□□ -1.06
SKA2-201ENST00000330137 GRAPQ13588 217 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 POU6F1Q14863 301 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 SURF1Q15526 300 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 TYSND1Q2T9J0 566 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 ANO4Q32M45 955 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 PUS10Q3MIT2 529 aaKnown RBP8.42□□□□□ -1.06
SKA2-201ENST00000330137 PTPN20Q4JDL3 420 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 C6orf141Q5SZD1 244 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 FAM102BQ5T8I3 360 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 ZCCHC8Q6NZY4 707 aaKnown RBP8.42□□□□□ -1.06
SKA2-201ENST00000330137 CATSPER4Q7RTX7 472 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 PROSER1Q86XN7 944 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 CLIP4Q8N3C7 705 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 JOSD2Q8TAC2 188 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 GRAPLQ8TC17 118 aaPredicted RBP8.42□□□□□ -1.06
SKA2-201ENST00000330137 SPPL2BQ8TCT7 592 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 YIPF6Q96EC8 236 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 TRIM54Q9BYV2 358 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 NIF3L1Q9GZT8 377 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 TMEM45AQ9NWC5 275 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 SNTG2Q9NY99 539 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 JAG2Q9Y219 1238 aa8.42□□□□□ -1.06
SKA2-201ENST00000330137 TMA7Q9Y2S6 64 aaKnown RBP8.42□□□□□ -1.06
SKA2-201ENST00000330137 CAB39Q9Y376 341 aaPredicted RBP8.42□□□□□ -1.06
SKA2-201ENST00000330137 CNTNAP1P78357 1384 aa8.41□□□□□ -1.06
SKA2-201ENST00000330137 SIP14410 1827 aa8.41□□□□□ -1.06
SKA2-201ENST00000330137 CLDN24A6NM45 220 aa8.41□□□□□ -1.06
SKA2-201ENST00000330137 AP3B1O00203 1094 aa8.41□□□□□ -1.06
SKA2-201ENST00000330137 BET1O15155 118 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms