RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CPB2Q96IY4 423 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 FUNDC2Q9BWH2 189 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 TMEM39BQ9GZU3 492 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 MRPL46Q9H2W6 279 aaKnown RBP12.84□□□□□ -0.35
CCDC60-201ENST00000327554 SNX25Q9H3E2 840 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 IL1RL2Q9HB29 575 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 CMTM6Q9NX76 183 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 FNDC1Q4ZHG4 1894 aaPredicted RBP12.84□□□□□ -0.35
CCDC60-201ENST00000327554 KCNK1O00180 336 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 GPIP06744 558 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 FCGR1AP12314 374 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 GPX3P22352 226 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 NR4A1P22736 598 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 GSTM2P28161 218 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 ARL4AP40617 200 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 IFITM2Q01629 132 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 TRIM32Q13049 653 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 TIGD2Q4W5G0 525 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 KCTD11Q693B1 232 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 IQSEC1Q6DN90 963 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 RPS27LQ71UM5 84 aaKnown RBP12.84□□□□□ -0.35
CCDC60-201ENST00000327554 FAM35AQ86V20 835 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 MFSD4AQ8N468 514 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 ZFP90Q8TF47 636 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 AFG1LQ8WV93 481 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 LPAR1Q92633 364 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 FBRSL1Q9HCM7 1045 aaKnown RBP12.84□□□□□ -0.35
CCDC60-201ENST00000327554 IFT52Q9Y366 437 aa12.84□□□□□ -0.35
CCDC60-201ENST00000327554 TCRBV5S2A0A599 114 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 B4GALT5O43286 388 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 MAFO75444 373 aaPredicted RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 AHSGP02765 367 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 ALDOCP09972 364 aaKnown RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 HTR1BP28222 390 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 ATP4BP51164 291 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 EN1Q05925 392 aaPredicted RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 LAMTOR4Q0VGL1 99 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 Q3C1V9 767 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 MFSD4BQ5TF39 518 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 JADE1Q6IE81 842 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 CRTC3Q6UUV7 619 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 PLEKHG7Q6ZR37 379 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 LARP4Q71RC2 724 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 CUZD1Q86UP6 607 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 SPARTQ8N0X7 666 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 RNF149Q8NC42 400 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 SLC35F5Q8WV83 523 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 TRIB2Q92519 343 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 VMP1Q96GC9 406 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 MAGED4Q96JG8 741 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 BTN2A3PQ96KV6 586 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 RPL10LQ96L21 214 aaKnown RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 PCYT2Q99447 389 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 HOPXQ9BPY8 73 aaPredicted RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 MLPHQ9BV36 600 aaPredicted RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 NDEL1Q9GZM8 345 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 RPF1Q9H9Y2 349 aaKnown RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 INTS10Q9NVR2 710 aaKnown RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 GMIPQ9P107 970 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 MTRRQ9UBK8 725 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 KLQ9UEF7 1012 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 KIAA1257Q9ULG3 409 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 SHROOM3Q8TF72 1996 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 IGKV6D-21A0A0A0MT36 114 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 DYTNA2CJ06 578 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 BBIP1A8MTZ0 92 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 LACTBL1A8MY62 500 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 AXIN1O15169 862 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 MT-CO1P00395 513 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 MTHFD1P11586 935 aaKnown RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 KCNA5P22460 613 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 CRHBPP24387 322 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 ATP5F1P24539 256 aaPredicted RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 PTPN3P26045 913 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 ATICP31939 592 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 RAB10P61026 200 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 MAPRE1Q15691 268 aaKnown RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 SOWAHAQ2M3V2 549 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 ATF7IP2Q5U623 682 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 PRMT9Q6P2P2 845 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 LINC00523Q86TU6 105 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 MINDY1Q8N5J2 469 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 PAPD5Q8NDF8 572 aaKnown RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 HPDLQ96IR7 371 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 APOL2Q9BQE5 337 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 NT5C1AQ9BXI3 368 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 NACA2Q9H009 215 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 CDT1Q9H211 546 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 MAGEE1Q9HCI5 957 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 RCOR3Q9P2K3 495 aaPredicted RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 ENPP5Q9UJA9 477 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.36
CCDC60-201ENST00000327554 MYLKQ15746 1914 aa12.83□□□□□ -0.36
CCDC60-201ENST00000327554 MAGEB16A2A368 324 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 UGT2B11O75310 529 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 HTR1AP08908 422 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 TPH1P17752 444 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 CYP2B6P20813 491 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 SLC6A2P23975 617 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms