RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 GSAPA4D1B5 854 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 RFXANKO14593 260 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 ALOX15BO15296 676 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 LINC00032P0C843 101 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 OR4A15Q8NGL6 344 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 BTBD9Q96Q07 612 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 CBFA2T3O75081 653 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 UGT2B11O75310 529 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 MAFO75444 373 aaPredicted RBP21.1■□□□□ 0.97
RNF40-201ENST00000324685 FBXO42Q6P3S6 717 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 SPATA19Q7Z5L4 167 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 ACO2Q99798 780 aaKnown RBP21.1■□□□□ 0.97
RNF40-201ENST00000324685 PTCH2Q9Y6C5 1203 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 NOMO3P69849 1222 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 AKIRIN2Q53H80 203 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 SAPCD2Q86UD0 394 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 ALYREFQ86V81 257 aaKnown RBP21.1■□□□□ 0.97
RNF40-201ENST00000324685 SHC3Q92529 594 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 BRD9Q9H8M2 597 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 TBC1D3BA6NDS4 549 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 BUD23O43709 281 aaKnown RBP21.1■□□□□ 0.97
RNF40-201ENST00000324685 TGDSO95455 350 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 FGF1P05230 155 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 TCF4P15884 667 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 CASP5P51878 434 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 PACS1Q6VY07 963 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 PIGZQ86VD9 579 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 OR4L1Q8NH43 312 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 PRDM12Q9H4Q4 367 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 G3V2T6 193 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 SLC22A3O75751 556 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 GOT1P17174 413 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 UGT1A5P35504 534 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 STARP49675 285 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 PUDPQ08623 228 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 TMEM161BQ8NDZ6 487 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 OR52E6Q96RD3 313 aa21.1■□□□□ 0.97
RNF40-201ENST00000324685 LRIG2O94898 1065 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 S100GP29377 79 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 RAB25P57735 213 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 CYP4F2P78329 520 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 CYP4F3Q08477 520 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 RIOX2Q8IUF8 465 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 TRMOQ9BU70 441 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 ITSN1Q15811 1721 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 POTEHQ6S545 545 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 ATG14Q6ZNE5 492 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 CORO1CQ9ULV4 474 aaPredicted RBP21.09■□□□□ 0.97
RNF40-201ENST00000324685 ABCA9Q8IUA7 1624 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 CDC25CP30307 473 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 ROR2Q01974 943 aaKnown RBP21.09■□□□□ 0.97
RNF40-201ENST00000324685 PSMD5Q16401 504 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 PTCHD4Q6ZW05 846 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 GPR156Q8NFN8 814 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 FAM163AQ96GL9 167 aaPredicted RBP21.09■□□□□ 0.97
RNF40-201ENST00000324685 ING3Q9NXR8 418 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 SAMD4AQ9UPU9 718 aaKnown RBP21.09■□□□□ 0.97
RNF40-201ENST00000324685 GCATO75600 419 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 SERPINA1P01009 418 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 CSH1P0DML2 217 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 CSH2P0DML3 217 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 NR2F6P10588 404 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 EPHA3P29320 983 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 OLR1P78380 273 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 MYBPC1Q00872 1141 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 FKBP1CQ5VVH2 108 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 FAM171BQ6P995 826 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 DENND1CQ8IV53 801 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.09■□□□□ 0.979e-6■■□□□ 11.8
RNF40-201ENST00000324685 TBC1D21Q8IYX1 336 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 CLIC5Q9NZA1 410 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 IRAK3Q9Y616 596 aa21.09■□□□□ 0.97
RNF40-201ENST00000324685 C5orf22Q49AR2 442 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 LINGO1Q96FE5 620 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 OXCT2Q9BYC2 517 aaPredicted RBP21.08■□□□□ 0.97
RNF40-201ENST00000324685 LMAN2LQ9H0V9 348 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 GPSM3Q9Y4H4 160 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 TNS2Q63HR2 1409 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 PTPRAP18433 802 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 MRPS6P82932 125 aaKnown RBP21.08■□□□□ 0.97
RNF40-201ENST00000324685 IKBKEQ14164 716 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 AP5B1Q2VPB7 878 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 ATP13A4Q4VNC1 1196 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 AMIGO2Q86SJ2 522 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 TRPV3Q8NET8 790 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 DDX4Q9NQI0 724 aaKnown RBP21.08■□□□□ 0.97
RNF40-201ENST00000324685 TMPRSS4Q9NRS4 437 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 EDF1O60869 148 aaKnown RBP21.08■□□□□ 0.97
RNF40-201ENST00000324685 IFNGP01579 166 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 SLC6A2P23975 617 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 MARSP56192 900 aaKnown RBP21.08■□□□□ 0.97
RNF40-201ENST00000324685 FNBP1LQ5T0N5 605 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 DEF8Q6ZN54 512 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 CACUL1Q86Y37 369 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 RBFAQ8N0V3 343 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 MAT2BQ9NZL9 334 aa21.08■□□□□ 0.97
RNF40-201ENST00000324685 CALCAP01258 141 aa21.08■□□□□ 0.96
RNF40-201ENST00000324685 RPL9P32969 192 aaKnown RBP21.08■□□□□ 0.96
RNF40-201ENST00000324685 BTN2A1Q7KYR7 527 aa21.08■□□□□ 0.96
RNF40-201ENST00000324685 KLHL23Q8NBE8 558 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms